Osman Makarim Elfadil M, Osman Rieham Sallah H, Elmubarak Sara A A, Dirar Amina I, Konozy Emadeldin Hassan E
Department of Biotechnology, Africa City of Technology (ACT), Khartoum, Sudan.
Medicinal, Aromatic Plants and Traditional Medicine Research Institute (MAPTRI), National Center for Research, Mek Nimr Street, Khartoum, Sudan.
Saudi J Biol Sci. 2023 Jun;30(6):103676. doi: 10.1016/j.sjbs.2023.103676. Epub 2023 May 4.
The date palm, is a vital crop in nations in the Middle East and North Africa. The date palm was thought to have outstanding traditional medicinal value because it was abundant in phytochemicals with diverse chemical structures. The date palm's ability to withstand harsh environments could be partly attributed to a class of proteins known as lectins, which are carbohydrate-binding proteins that can bind sugar moieties reversibly and without changing their chemical structures. After scanning the genome (GCF 009389715.1), this study discovered 196 possible lectin homologs from 11 different families, some specific to plants. At the same time, others could also be found in other kingdoms of life. Their domain architectures and functional amino acid residues were investigated, and they yielded a 40% true-lectin with known conserved carbohydrate-binding residues. Further, their probable subcellular localization, physiochemical and phylogenetic analyses were also performed. Scanning all putative lectin homologs against the anticancer peptide (ACP) dataset found in the AntiCP2.0 webpage identified 26 genes with protein kinase receptors (Lec-KRs) belonging to 5 lectin families, which are reported to have at least one ACP motif. Our study offers the first account of -lectins and their organization that can be used for further structural and functional analysis and investigating their potential as anticancer proteins.
海枣是中东和北非国家的一种重要作物。海枣被认为具有出色的传统药用价值,因为它富含化学结构多样的植物化学物质。海枣耐受恶劣环境的能力部分可归因于一类称为凝集素的蛋白质,凝集素是一种碳水化合物结合蛋白,能够可逆地结合糖部分且不改变其化学结构。在扫描基因组(GCF 009389715.1)后,本研究从11个不同家族中发现了196个可能的凝集素同源物,其中一些是植物特有的。同时,在其他生命王国中也能找到其他一些同源物。对它们的结构域结构和功能性氨基酸残基进行了研究,结果发现40%的凝集素具有已知的保守碳水化合物结合残基。此外,还对它们可能的亚细胞定位、理化性质和系统发育进行了分析。在AntiCP2.0网页上的抗癌肽(ACP)数据集中扫描所有假定的凝集素同源物,发现26个具有蛋白激酶受体(Lec-KRs)的基因,它们属于5个凝集素家族,据报道这些家族至少有一个ACP基序。我们的研究首次报道了凝集素及其组成,可用于进一步的结构和功能分析,并研究它们作为抗癌蛋白的潜力。