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外周血单细胞 RNA 测序揭示卵巢早衰患者免疫细胞功能障碍。

Single-cell RNA sequencing of peripheral blood reveals immune cell dysfunction in premature ovarian insufficiency.

机构信息

Department of Obstetrics and Gynecology, The First Affiliated Hospital of Naval Medical University, Shanghai, China.

Department of Precision Medicine, Translational Medicine Research Center, Naval Medical University, Shanghai, China.

出版信息

Front Endocrinol (Lausanne). 2023 May 8;14:1129657. doi: 10.3389/fendo.2023.1129657. eCollection 2023.

Abstract

BACKGROUND

Premature ovarian insufficiency (POI) is one of the most common causes of female infertility and the etiology is highly heterogeneous. Most cases are idiopathic and the pathogenesis remains unclear. Previous studies proved that the immune system plays a crucial role in POI. However, the precise role of immune system remains unclear. This study aimed to analyze the characteristics of peripheral blood mononuclear cells (PBMC) from patients with POI by single-cell RNA sequencing (scRNA-seq) and to explore the potential involvement of immune response in idiopathic POI.

METHODS

PBMC was collected from three normal subjects and three patients with POI. PBMC was subjected to scRNA-seq to identify cell clusters and differently expressed genes (DEGs). Enrichment analysis and cell-cell communication analysis were performed to explore the most active biological function in the immune cells of patients with POI.

RESULTS

In total, 22 cell clusters and 10 cell types were identified in the two groups. Compared with normal subjects, the percentage of classical monocytes and NK cells was decreased, the abundance of plasma B cells was increased, and CD4/CD8 ratio was significantly higher in POI. Furthermore, upregulation of and downregulation of , and were identified, which were enriched in NK cell-mediated cytotoxicity, antigen processing and presentation, and IL-17 signaling pathway. Among them, and were respectively the most significantly upregulated and downregulated genes among all cell clusters of POI. The strength of cell-cell communication differed between the healthy subjects and patients with POI, and multiple signaling pathways were assessed. The TNF pathway was found to be unique in POI with classical monocytes being the major target and source of TNF signaling.

CONCLUSIONS

Dysfunction of cellular immunity is related to idiopathic POI. Monocytes, NK cells, and B cells, and their enriched differential genes may play a role in the development of idiopathic POI. These findings provide novel mechanistic insight for understanding the pathogenesis of POI.

摘要

背景

卵巢早衰(POI)是女性不孕的最常见原因之一,其病因高度异质。大多数病例是特发性的,发病机制尚不清楚。先前的研究证明免疫系统在 POI 中起着至关重要的作用。然而,免疫系统的确切作用仍不清楚。本研究旨在通过单细胞 RNA 测序(scRNA-seq)分析 POI 患者外周血单个核细胞(PBMC)的特征,并探讨免疫反应在特发性 POI 中的潜在作用。

方法

从 3 名正常受试者和 3 名 POI 患者中采集 PBMC。将 PBMC 进行 scRNA-seq,以鉴定细胞簇和差异表达基因(DEG)。进行富集分析和细胞间通讯分析,以探讨 POI 患者免疫细胞中最活跃的生物学功能。

结果

总共在两组中鉴定出 22 个细胞簇和 10 种细胞类型。与正常受试者相比,经典单核细胞和 NK 细胞的比例降低,浆细胞的丰度增加,POI 患者的 CD4/CD8 比值明显升高。此外,鉴定出上调和下调的、和,它们富集在 NK 细胞介导的细胞毒性、抗原加工和呈递以及 IL-17 信号通路中。其中、和分别是 POI 所有细胞簇中上调和下调最显著的基因。健康受试者和 POI 患者之间的细胞间通讯强度存在差异,并评估了多个信号通路。发现 TNF 途径在 POI 中是独特的,经典单核细胞是 TNF 信号的主要靶标和来源。

结论

细胞免疫功能障碍与特发性 POI 有关。单核细胞、NK 细胞和 B 细胞及其丰富的差异基因可能在特发性 POI 的发展中起作用。这些发现为理解 POI 的发病机制提供了新的机制见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4ff2/10200870/ea9cdf1de430/fendo-14-1129657-g001.jpg

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