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一种硬骨鱼精子甲基化组及其对水温的敏感性

Spermatozoa methylome and its sensitivity to water temperature in a teleost fish.

作者信息

Brionne Aurélien, Goupil Anne-Sophie, Kica Stéphanie, Lareyre Jean-Jacques, Labbé Catherine, Laurent Audrey

机构信息

INRAE, UR1037 LPGP, Fish Physiology and Genomics, Campus de Beaulieu, F-35000 Rennes, France.

INRAE, UR1037 LPGP, Fish Physiology and Genomics, Campus de Beaulieu, F-35000 Rennes, France.

出版信息

Sci Total Environ. 2023 Sep 20;892:164077. doi: 10.1016/j.scitotenv.2023.164077. Epub 2023 May 29.

Abstract

Global climate change and heat waves are sources of stress which fish are facing in the wild as well as in aquaculture context. In coping with important environmental variations, they demonstrate a great plasticity and a tendency for acclimation throughout generations. Here, we question whether fish might be prone to transmit epigenetic alterations through their gametes to their offspring, thus driving rapid environmental adaptation. The question of epigenetic inheritance in fish has become of crucial interest in the recent years, when the mammalian model of methylome erasure in germ cells and embryos was found not to be conserved. In this work, by sequencing spermatozoa after bisulfite conversion, we characterized the methylation landscape of the paternal gamete in rainbow trout (in comparison to muscle) before to demonstrate its sensitivity to a 4 °C increased rearing temperature during spermatogenesis. We found that spermatozoa methylome specifically primes housekeeping and developmental genes for activation and might be instrumental to early development. Most of these methylation-free promoters were not affected by temperature, attesting the robustness of the epigenetic programming of early development. However, the increase of temperature triggered the differential methylation of 5359 regions, among which 560 gene promoters control spermiogenesis and lipid metabolism. We therefore report, for the first time in fish, that sperm epigenetic landscape carries marks of parental thermal living conditions, suggesting that DNA methylation might be a molecular basis of intergenerational inheritance.

摘要

全球气候变化和热浪是鱼类在野生环境以及水产养殖环境中所面临的压力源。在应对重要的环境变化时,它们表现出极大的可塑性以及多代间的适应倾向。在此,我们探讨鱼类是否可能易于通过其配子将表观遗传改变传递给后代,从而推动快速的环境适应。近年来,当发现生殖细胞和胚胎中甲基化组消除的哺乳动物模型并不保守时,鱼类表观遗传继承的问题就变得至关重要。在这项工作中,通过对亚硫酸氢盐转化后的精子进行测序,我们在展示精子发生过程中父本配子(与肌肉相比)的甲基化图谱对饲养温度升高4°C的敏感性之前,对虹鳟父本配子的甲基化图谱进行了表征。我们发现精子甲基化组特异性地使管家基因和发育基因准备好被激活,并且可能对早期发育有帮助。这些大多无甲基化的启动子不受温度影响,证明了早期发育表观遗传编程的稳健性。然而,温度升高引发了5359个区域的差异甲基化,其中560个基因启动子控制精子发生和脂质代谢。因此,我们首次在鱼类中报道,精子表观遗传图谱带有亲代热生活条件的印记,这表明DNA甲基化可能是代际遗传的分子基础。

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