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新型 NLO 5-羟基-3,6,7,8-四甲氧基黄酮的分子动力学研究、Hirshfeld 表面分析和量子化学评价的分子对接研究。

Molecular dynamics investigation, Hirshfeld surface analysis, and molecular docking studies by quantum chemical evaluation of new novel NLO 5-hydroxy-3,6,7,8-tetramethoxyflavone.

机构信息

PG & Research Department of Physics, Nehru Memorial College, Trichy, 621007, Tamil Nadu, India.

出版信息

J Mol Model. 2023 Jun 6;29(7):201. doi: 10.1007/s00894-023-05610-8.

DOI:10.1007/s00894-023-05610-8
PMID:37277646
Abstract

CONTEXT

The molecular structure of the compound, spectroscopic investigations (FT-IR, FT-Raman, and NMR), and the frontier energy level analysis of 5-hydroxy-3,6,7,8-tetramethoxyflavone (5HTMF) were all examined using density functional theory (DFT) methods. Comparisons were made between predicted DFT theoretical vibrational wavenumbers and observed data. The chemical reactivity of 5HTMF was studied using DFT/PBEPBE approach that included frontier orbital energies, optical characteristics, and chemical descriptors. All our theoretical calculations have been done using the Gaussian 09W package.

METHODS

The cytotoxic activity of the bioactive ligand was checked against human cancer cell lines A549 and MCF-7 in vitro by the MTT assay. Hence, the docking and in vitro activity against cancer cell lines display positive results. The present ligand performance appears to be a promising way for anticancer agents with better efficacy. A molecular docking study of 5HTMF drug against Bcl-2 protein structures was performed by using the open-source AutoDock 4.2 and AutoDock Vina tools program packages.

摘要

背景

采用密度泛函理论(DFT)方法对化合物的分子结构、光谱研究(FT-IR、FT-Raman 和 NMR)以及 5-羟基-3,6,7,8-四甲氧基黄酮(5HTMF)的前沿能级分析进行了研究。预测的 DFT 理论振动波数与观察数据进行了比较。使用 DFT/PBEPBE 方法研究了 5HTMF 的化学反应性,其中包括前沿轨道能量、光学特性和化学描述符。所有的理论计算都是使用 Gaussian 09W 软件包完成的。

方法

通过 MTT 试验,体外检测生物活性配体对人肺癌细胞系 A549 和 MCF-7 的细胞毒性活性。因此,对接和体外活性对癌细胞系显示出积极的结果。目前的配体性能似乎是一种有前途的方法,用于具有更好疗效的抗癌药物。使用开源 AutoDock 4.2 和 AutoDock Vina 工具程序包对 5HTMF 药物与 Bcl-2 蛋白结构的分子对接研究进行了研究。

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本文引用的文献

1
Drug resistance and combating drug resistance in cancer.癌症中的耐药性与抗耐药性
Cancer Drug Resist. 2019;2(2):141-160. doi: 10.20517/cdr.2019.10. Epub 2019 Jun 19.
2
Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.《全球癌症统计数据 2020:全球 185 个国家和地区 36 种癌症的发病率和死亡率估计》。
CA Cancer J Clin. 2021 May;71(3):209-249. doi: 10.3322/caac.21660. Epub 2021 Feb 4.
3
Cancer Statistics, 2021.癌症统计数据,2021.
CA Cancer J Clin. 2021 Jan;71(1):7-33. doi: 10.3322/caac.21654. Epub 2021 Jan 12.
4
Synthesis and evaluation of 5-(1H-indol-3-yl)-N-aryl-1,3,4-oxadiazol-2-amines as Bcl-2 inhibitory anticancer agents.5-(1H-吲哚-3-基)-N-芳基-1,3,4-恶二唑-2-胺作为Bcl-2抑制性抗癌剂的合成与评价
Bioorg Med Chem Lett. 2017 Feb 15;27(4):1037-1040. doi: 10.1016/j.bmcl.2016.12.061. Epub 2016 Dec 27.
5
Virtual screening, SAR, and discovery of 5-(indole-3-yl)-2-[(2-nitrophenyl)amino] [1,3,4]-oxadiazole as a novel Bcl-2 inhibitor.虚拟筛选、构效关系研究以及新型Bcl-2抑制剂5-(吲哚-3-基)-2-[(2-硝基苯基)氨基][1,3,4]恶二唑的发现
Chem Biol Drug Des. 2017 Jul;90(1):147-155. doi: 10.1111/cbdd.12936. Epub 2017 Feb 24.
6
Cisplatin in cancer therapy: molecular mechanisms of action.顺铂在癌症治疗中的作用:分子作用机制
Eur J Pharmacol. 2014 Oct 5;740:364-78. doi: 10.1016/j.ejphar.2014.07.025. Epub 2014 Jul 21.
7
Flavones: an important scaffold for medicinal chemistry.类黄酮:药物化学的重要支架。
Eur J Med Chem. 2014 Sep 12;84:206-39. doi: 10.1016/j.ejmech.2014.07.013. Epub 2014 Jul 5.
8
MMDB and VAST+: tracking structural similarities between macromolecular complexes.MMDB 和 VAST+:追踪大分子复合物之间的结构相似性。
Nucleic Acids Res. 2014 Jan;42(Database issue):D297-303. doi: 10.1093/nar/gkt1208. Epub 2013 Dec 6.
9
Erlotinib binds both inactive and active conformations of the EGFR tyrosine kinase domain.厄洛替尼结合 EGFR 酪氨酸激酶结构域的无活性和活性构象。
Biochem J. 2012 Dec 15;448(3):417-23. doi: 10.1042/BJ20121513.
10
A semiempirical free energy force field with charge-based desolvation.一种基于电荷去溶剂化的半经验自由能力场。
J Comput Chem. 2007 Apr 30;28(6):1145-52. doi: 10.1002/jcc.20634.