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肿瘤教育血小板血液检测用于非小细胞肺癌的检测和管理。

Tumor-educated platelet blood tests for Non-Small Cell Lung Cancer detection and management.

机构信息

Department of Neurosurgery, Cancer Center Amsterdam, Amsterdam UMC, VU University Medical Center, De Boelelaan 1117, 1081 HV, Amsterdam, The Netherlands.

Cancer Center Amsterdam, Amsterdam, The Netherlands.

出版信息

Sci Rep. 2023 Jun 8;13(1):9359. doi: 10.1038/s41598-023-35818-w.

Abstract

Liquid biopsy approaches offer a promising technology for early and minimally invasive cancer detection. Tumor-educated platelets (TEPs) have emerged as a promising liquid biopsy biosource for the detection of various cancer types. In this study, we processed and analyzed the TEPs collected from 466 Non-small Cell Lung Carcinoma (NSCLC) patients and 410 asymptomatic individuals (controls) using the previously established thromboSeq protocol. We developed a novel particle-swarm optimization machine learning algorithm which enabled the selection of an 881 RNA biomarker panel (AUC 0.88). Herein we propose and validate in an independent cohort of samples (n = 558) two approaches for blood samples testing: one with high sensitivity (95% NSCLC detected) and another with high specificity (94% controls detected). Our data explain how TEP-derived spliced RNAs may serve as a biomarker for minimally-invasive clinical blood tests, complement existing imaging tests, and assist the detection and management of lung cancer patients.

摘要

液体活检方法为早期和微创癌症检测提供了一种很有前途的技术。肿瘤教育血小板(TEP)已成为检测各种癌症类型的很有前途的液体活检生物源。在这项研究中,我们使用先前建立的血栓测序协议处理和分析了从 466 名非小细胞肺癌(NSCLC)患者和 410 名无症状个体(对照)中收集的 TEP。我们开发了一种新的粒子群优化机器学习算法,该算法能够选择 881 个 RNA 生物标志物组(AUC 为 0.88)。在此,我们在一个独立的样本队列(n=558)中提出并验证了两种血液样本测试方法:一种具有高灵敏度(检测到 95%的 NSCLC),另一种具有高特异性(检测到 94%的对照)。我们的数据解释了 TEP 衍生的剪接 RNA 如何作为微创临床血液测试的生物标志物,补充现有的成像测试,并协助肺癌患者的检测和管理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8034/10250384/bbad0b3543eb/41598_2023_35818_Fig1_HTML.jpg

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