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探索闽南地区低枸橼酸尿性尿路结石患者肠道微生物群特征并构建临床诊断模型。

Exploring the characteristics of gut microbiome in patients of Southern Fujian with hypocitraturia urolithiasis and constructing clinical diagnostic models.

作者信息

Wang Jialiang, Chen Guofeng, Chen Heyi, Chen Jiabi, Su Qingfu, Zhuang Wei

机构信息

Department of Urology, The Second Affiliated Hospital of Fujian Medical University, Licheng District Zhongshan North Road, Quanzhou, 362000, Fujian, China.

出版信息

Int Urol Nephrol. 2023 Aug;55(8):1917-1929. doi: 10.1007/s11255-023-03662-6. Epub 2023 Jun 9.

Abstract

PURPOSE

Hypocitraturia is an important cause of urolithiasis. Exploring the characteristics of the gut microbiome (GMB) of hypocitriuria urolithiasis (HCU) patients can provide new ideas for the treatment and prevention of urolithiasis.

METHODS

The 24 h urinary citric acid excretion of 19 urolithiasis patients was measured, and patients were divided into the HCU group and the normal citrate urolithiasis (NCU) group. The 16 s ribosomal RNA (rRNA) was used to detect GMB composition differences and construct operational taxonomic units (OTUs) coexistence networks. The key bacterial community was determined by Lefse analysis, Metastats analysis and RandomForest analysis. Redundancy analysis (RDA) and Pearson correlation analysis visualized the correlation between key OTUs and clinical features and then established the disease diagnosis model of microbial-clinical indicators. Finally, PICRUSt2 was used to explore the metabolic pathway of related GMB in HCU patients.

RESULTS

The alpha diversity of GMB in HCU group was increased and Beta diversity analysis suggested significant differences between HCU and NCU groups, which was related to renal function damage and urinary tract infection. Ruminococcaceae_ge and Turicibacter are the characteristic bacterial groups of HCU. Correlation analysis showed that the characteristic bacterial groups were significantly associated with various clinical features. Based on this, the diagnostic models of microbiome-clinical indicators in HCU patients were constructed with the areas under the curve (AUC) of 0.923 and 0.897, respectively. Genetic and metabolic processes of HCU are affected by changes in GMB abundance.

CONCLUSION

GMB disorder may be involved in the occurrence and clinical characteristics of HCU by influencing genetic and metabolic pathways. The new microbiome-clinical indicator diagnostic model is effective.

摘要

目的

低枸橼酸尿症是尿路结石的重要病因。探究低枸橼酸尿症尿路结石(HCU)患者肠道微生物群(GMB)的特征可为尿路结石的治疗和预防提供新思路。

方法

测量19例尿路结石患者的24小时尿柠檬酸排泄量,并将患者分为HCU组和正常枸橼酸尿路结石(NCU)组。采用16s核糖体RNA(rRNA)检测GMB组成差异并构建可操作分类单元(OTU)共存网络。通过Lefse分析、Metastats分析和随机森林分析确定关键细菌群落。冗余分析(RDA)和Pearson相关性分析可视化关键OTU与临床特征之间的相关性,进而建立微生物-临床指标疾病诊断模型。最后,使用PICRUSt2探索HCU患者相关GMB的代谢途径。

结果

HCU组GMB的α多样性增加,β多样性分析表明HCU组和NCU组之间存在显著差异,这与肾功能损害和尿路感染有关。瘤胃球菌科_ge和Turicibacter是HCU的特征菌群。相关性分析表明,特征菌群与各种临床特征显著相关。基于此,构建了HCU患者微生物-临床指标诊断模型,曲线下面积(AUC)分别为0.923和0.897。HCU的遗传和代谢过程受GMB丰度变化的影响。

结论

GMB紊乱可能通过影响遗传和代谢途径参与HCU的发生及临床特征。新的微生物-临床指标诊断模型有效。

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