Luan Xiaofeng, Liu Pengbin, Huang Di, Zhao Haiping, Li Yuang, Sun Sheng, Zhang Wenchang, Zhang Lingqian, Li Mingxiao, Zhi Tian, Zhao Yang, Huang Chengjun
Institute of Microelectronics of the Chinese Academy of Sciences, Beijing, China.
University of Chinese Academy of Sciences, Beijing, China.
Microsyst Nanoeng. 2023 Jun 8;9:77. doi: 10.1038/s41378-023-00545-9. eCollection 2023.
Real-time transformation was important for the practical implementation of impedance flow cytometry. The major obstacle was the time-consuming step of translating raw data to cellular intrinsic electrical properties (e.g., specific membrane capacitance C and cytoplasm conductivity σ). Although optimization strategies such as neural network-aided strategies were recently reported to provide an impressive boost to the translation process, simultaneously achieving high speed, accuracy, and generalization capability is still challenging. To this end, we proposed a fast parallel physical fitting solver that could characterize single cells' C and σ within 0.62 ms/cell without any data preacquisition or pretraining requirements. We achieved the 27000-fold acceleration without loss of accuracy compared with the traditional solver. Based on the solver, we implemented physics-informed real-time impedance flow cytometry (piRT-IFC), which was able to characterize up to 100,902 cells' C and σ within 50 min in a real-time manner. Compared to the fully connected neural network (FCNN) predictor, the proposed real-time solver showed comparable processing speed but higher accuracy. Furthermore, we used a neutrophil degranulation cell model to represent tasks to test unfamiliar samples without data for pretraining. After being treated with cytochalasin B and N-Formyl-Met-Leu-Phe, HL-60 cells underwent dynamic degranulation processes, and we characterized cell's C and σ using piRT-IFC. Compared to the results from our solver, accuracy loss was observed in the results predicted by the FCNN, revealing the advantages of high speed, accuracy, and generalizability of the proposed piRT-IFC.
实时转换对于阻抗流式细胞术的实际应用至关重要。主要障碍是将原始数据转换为细胞固有电学特性(例如,比膜电容C和细胞质电导率σ)这一耗时步骤。尽管最近报道了诸如神经网络辅助策略等优化策略,可显著促进转换过程,但同时实现高速、准确和泛化能力仍具有挑战性。为此,我们提出了一种快速并行物理拟合求解器,该求解器无需任何数据预采集或预训练要求,即可在每细胞0.62毫秒内表征单个细胞的C和σ。与传统求解器相比,我们实现了27000倍的加速且不损失精度。基于该求解器,我们实现了物理信息实时阻抗流式细胞术(piRT-IFC),它能够在50分钟内实时表征多达100902个细胞的C和σ。与全连接神经网络(FCNN)预测器相比,所提出的实时求解器显示出相当的处理速度,但具有更高的准确性。此外,我们使用中性粒细胞脱颗粒细胞模型来表示任务,以测试没有预训练数据的陌生样本。在用细胞松弛素B和N-甲酰甲硫氨酰亮氨酰苯丙氨酸处理后,HL-60细胞经历了动态脱颗粒过程,我们使用piRT-IFC对细胞的C和σ进行了表征。与我们求解器的结果相比,FCNN预测结果中观察到了精度损失,这揭示了所提出的piRT-IFC在高速、准确和泛化性方面的优势。