Department of Biochemistry, University of Washington, Seattle, WA, USA.
Department of Biochemistry and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
EMBO J. 2023 Aug 1;42(15):e113565. doi: 10.15252/embj.2023113565. Epub 2023 Jun 12.
BRCA1/BARD1 is a tumor suppressor E3 ubiquitin (Ub) ligase with roles in DNA damage repair and in transcriptional regulation. BRCA1/BARD1 RING domains interact with nucleosomes to facilitate mono-ubiquitylation of distinct residues on the C-terminal tail of histone H2A. These enzymatic domains constitute a small fraction of the heterodimer, raising the possibility of functional chromatin interactions involving other regions such as the BARD1 C-terminal domains that bind nucleosomes containing the DNA damage signal H2A K15-Ub and H4 K20me0, or portions of the expansive intrinsically disordered regions found in both subunits. Herein, we reveal novel interactions that support robust H2A ubiquitylation activity mediated through a high-affinity, intrinsically disordered DNA-binding region of BARD1. These interactions support BRCA1/BARD1 recruitment to chromatin and sites of DNA damage in cells and contribute to their survival. We also reveal distinct BRCA1/BARD1 complexes that depend on the presence of H2A K15-Ub, including a complex where a single BARD1 subunit spans adjacent nucleosome units. Our findings identify an extensive network of multivalent BARD1-nucleosome interactions that serve as a platform for BRCA1/BARD1-associated functions on chromatin.
BRCA1/BARD1 是一种肿瘤抑制因子 E3 泛素(Ub)连接酶,在 DNA 损伤修复和转录调控中发挥作用。BRCA1/BARD1 RING 结构域与核小体相互作用,促进组蛋白 H2A 尾部 C 端上不同残基的单泛素化。这些酶结构域构成异二聚体的一小部分,这使得与其他区域的功能染色质相互作用成为可能,如 BARD1 C 端结构域与含有 DNA 损伤信号 H2A K15-Ub 和 H4 K20me0 的核小体结合,或与两个亚基中存在的广泛的固有无序区域的部分结合。在此,我们揭示了支持通过 BARD1 高亲和力、固有无序 DNA 结合区域介导的强大 H2A 泛素化活性的新相互作用。这些相互作用支持 BRCA1/BARD1 向细胞中染色质和 DNA 损伤部位的募集,并有助于其存活。我们还揭示了依赖 H2A K15-Ub 的不同 BRCA1/BARD1 复合物,包括一个单个 BARD1 亚基跨越相邻核小体单位的复合物。我们的发现确定了一个广泛的多价 BARD1-核小体相互作用网络,作为 BRCA1/BARD1 相关功能在染色质上的平台。