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马来西亚患者中 exon3 基因突变与圆锥角膜的相关性。

The association between exon3 gene variants and keratoconus in Malaysian patients.

机构信息

Faculty of Medicine and Health Sciences, Universiti Tunku Abdul Rahman, Sg Long, Malaysia.

出版信息

Indian J Ophthalmol. 2023 Jun;71(6):2443-2447. doi: 10.4103/IJO.IJO_2894_22.

DOI:10.4103/IJO.IJO_2894_22
PMID:37322657
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10418017/
Abstract

PURPOSE

This case-control study aims to examine possible associations of VSX1 exon3 gene variants with the development of keratoconus (KC) in Malaysian patients.

METHODS

A case-control study was done on 42 keratoconus cases, 127 family member controls, and 96 normal controls.

RESULTS

Three gene variants, p.A182A, p.P237P, and p.R217H showed significant associations with keratoconus (P < 0.05). While p.A182A and p.P227P were more prevalent than in the family and normal controls (OR 3.14-4.05), the reverse was observed with p.R217H (OR 0.086-1.59). With Haploview analysis, p.A182A and p.P237P were shown to be in linkage disequilibrium (LD) (LOD (logarithm of the odds score) score of 2.0, r2 of 0.957, and 95% confidence interval (CI) of 0.96-1.00).

CONCLUSION

The study results suggest that the p.A182A and p.P237P variants could have contributed to the development of keratoconus in some Malaysians and that these two variants are likely to be co-inherited. In contrast, the p.R217H variant appeared to confer some protection against the development of keratoconus.

摘要

目的

本病例对照研究旨在探讨 VSX1 外显子 3 基因突变与马来西亚圆锥角膜(KC)发病的可能相关性。

方法

对 42 例圆锥角膜患者、127 名家族成员对照和 96 名正常对照进行病例对照研究。

结果

3 个基因变异,p.A182A、p.P237P 和 p.R217H 与圆锥角膜显著相关(P<0.05)。p.A182A 和 p.P227P 比家族和正常对照组更为常见(OR 3.14-4.05),而 p.R217H 则相反(OR 0.086-1.59)。通过 Haploview 分析,p.A182A 和 p.P237P 显示出连锁不平衡(LD)(对数优势比(LOD)评分 2.0,r2 为 0.957,95%置信区间(CI)为 0.96-1.00)。

结论

研究结果表明,p.A182A 和 p.P237P 变异可能导致部分马来西亚人发生圆锥角膜,且这两种变异可能共同遗传。相比之下,p.R217H 变异似乎对圆锥角膜的发生有一定的保护作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/776c/10418017/59010adbdc96/IJO-71-2443-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/776c/10418017/59010adbdc96/IJO-71-2443-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/776c/10418017/59010adbdc96/IJO-71-2443-g001.jpg

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本文引用的文献

1
A multi-ethnic genome-wide association study implicates collagen matrix integrity and cell differentiation pathways in keratoconus.一项多民族全基因组关联研究表明圆锥角膜与胶原基质完整性及细胞分化途径有关。
Commun Biol. 2021 Mar 1;4(1):266. doi: 10.1038/s42003-021-01784-0.
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The Prevalence and Risk Factors for Keratoconus: A Systematic Review and Meta-Analysis.圆锥角膜的患病率及危险因素:系统评价和荟萃分析。
Cornea. 2020 Feb;39(2):263-270. doi: 10.1097/ICO.0000000000002150.
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Rare, potentially pathogenic variants in 21 keratoconus candidate genes are not enriched in cases in a large Australian cohort of European descent.
在一个大型澳大利亚欧洲血统队列中,21 个圆锥角膜候选基因中的罕见、潜在致病性变异并未在病例中富集。
PLoS One. 2018 Jun 20;13(6):e0199178. doi: 10.1371/journal.pone.0199178. eCollection 2018.
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Genetic associations for keratoconus: a systematic review and meta-analysis.圆锥角膜的遗传关联:系统评价和荟萃分析。
Sci Rep. 2017 Jul 4;7(1):4620. doi: 10.1038/s41598-017-04393-2.
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Visual System Homeobox 1 (VSX1) Gene Analysis in Keratoconus: Design of Specific Primers and DNA Amplification Protocols for Accurate Molecular Characterization.圆锥角膜中视觉系统同源盒1(VSX1)基因分析:用于准确分子特征鉴定的特异性引物设计及DNA扩增方案
Clin Lab. 2016 Sep 1;62(9):1731-1737. doi: 10.7754/Clin.Lab.2016.160144.
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The genetic and environmental factors for keratoconus.圆锥角膜的遗传和环境因素。
Biomed Res Int. 2015;2015:795738. doi: 10.1155/2015/795738. Epub 2015 May 17.
7
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Acta Cytol. 2013;57(6):646-51. doi: 10.1159/000353297. Epub 2013 Oct 1.
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