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西瓜()中家族的特征分析:响应脱落酸、低温及干旱胁迫的鉴定、结构、进化及潜在功能

Characterization of family in watermelon (): identification, structure, evolution, and potential function in response to ABA, cold and drought stress.

作者信息

Wang Xinsheng, Jin Zhi, Ding Yina, Guo Meng

机构信息

School of Wine and Horticulture, Ningxia University, Yinchuan, China.

Key Laboratory of Modern Molecular Breeding for Dominant and Special Crops in Ningxia, Yinchuan, China.

出版信息

Front Genet. 2023 May 31;14:1201535. doi: 10.3389/fgene.2023.1201535. eCollection 2023.

Abstract

Watermelon () as a crop with important economic value, is widely cultivated around the world. The heat shock protein 70 (HSP70) family in plant is indispensable under stress conditions. However, no comprehensive analysis of watermelon family is reported to date. In this study, 12 genes were identified from watermelon, which were unevenly located in 7 out of 11 chromosomes and divided into three subfamilies. ClHSP70 proteins were predicted to be localized primarily in cytoplasm, chloroplast, and endoplasmic reticulum. Two pairs of segmental repeats and 1 pair of tandem repeats existed in genes, and underwent strong purification selection. There were many abscisic acid (ABA) and abiotic stress response elements in promoters. Additionally, the transcriptional levels of in roots, stems, true leaves, and cotyledons were also analyzed. Some of genes were also strongly induced by ABA. Furthermore, also had different degrees of response to drought and cold stress. The above data indicate that may be participated in growth and development, signal transduction and abiotic stress response, laying a foundation for further analysis of the function of ClHSP70s in biological processes.

摘要

西瓜()作为一种具有重要经济价值的作物,在全球广泛种植。植物中的热激蛋白70(HSP70)家族在胁迫条件下是不可或缺的。然而,迄今为止尚未见对西瓜家族的全面分析报道。在本研究中,从西瓜中鉴定出12个基因,它们不均匀地分布在11条染色体中的7条上,并分为三个亚家族。预测ClHSP70蛋白主要定位于细胞质、叶绿体和内质网。基因中存在两对片段重复和1对串联重复,且经历了强烈的纯化选择。基因启动子中有许多脱落酸(ABA)和非生物胁迫响应元件。此外,还分析了基因在根、茎、真叶和子叶中的转录水平。一些基因也受到ABA的强烈诱导。此外,基因对干旱和冷胁迫也有不同程度的响应。上述数据表明,基因可能参与生长发育、信号转导和非生物胁迫响应,为进一步分析ClHSP70s在生物学过程中的功能奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31d1/10265491/a3b00975362b/fgene-14-1201535-g001.jpg

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