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两个新的线粒体基因组(半翅目,长蝽科,窄缘长蝽亚科)的特征及长蝽总科的线粒体系统发育

Characterization of two new mitogenomes (Hemiptera, Lygaeidae, Ischnorhynchinae) and a mitochondrial phylogeny of Lygaeoidea.

作者信息

Gao Cuiqing, Dong Wen

机构信息

Co-Innovation Center for Sustainable Forestry in Southern China, College of Forestry, Nanjing Forestry University, Nanjing, Jiangsu 210037, China Nanjing Forestry University Nanjing China.

出版信息

Zookeys. 2023 Jun 8;1166:141-154. doi: 10.3897/zookeys.1166.104103. eCollection 2023.

Abstract

Lygaeidae is a large family of Hemiptera (Heteroptera) currently separated into three subfamilies, Ischnorhynchinae, Lygaeinae, and Orsillinae. In this research, the complete mitogenomes of the iscnorhynchines Zheng, Zou & Hsiao, 1979 and Zheng, Zou & Hsiao, 1979 were sequenced, and the phylogeny of and the Lygaeidae with known complete mitogenomes were examined. The mitogenomes are 15,174 bp and 15,399 bp in size, respectively, and comprised of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a control region (D-loop). Nucleotide composition is biased toward A and T, and the gene order is identical to that of the putative ancestral arrangement of insects. Eleven PCGs begin with a typical ATN, and the remaining two PCGs begin with TTG ( and ). All tRNAs had a typical cloverleaf secondary structure, but some of them had individual base mismatches. The phylogenetic analyses based on the concatenated nucleotide sequences of the 13 PCGs, using Bayesian inference and maximum likelihood, support the monophyly of Lygaeidae. The results show that and clustered with nine other Lygaeidae. This study includes the first complete sequencing of the mitochondrial genomes of two species, which will provide important data for studying the phylogenetic position of Lygaeidae in Lygaeoidea and reconstructing the phylogenetic relationships within Pentatomomorpha.

摘要

长蝽科是半翅目(异翅亚目)的一个大家族,目前分为三个亚科:窄缘长蝽亚科、长蝽亚科和奥氏长蝽亚科。在本研究中,对1979年郑、邹和萧描述的窄缘长蝽属物种的完整线粒体基因组进行了测序,并研究了该属以及具有已知完整线粒体基因组的长蝽科的系统发育。这两个线粒体基因组大小分别为15,174 bp和15,399 bp,由13个蛋白质编码基因(PCGs)、22个转运RNA基因(tRNAs)、两个核糖体RNA基因(rRNAs)和一个控制区(D环)组成。核苷酸组成偏向于A和T,基因顺序与推测的昆虫祖先排列相同。11个PCGs以典型的ATN起始,其余两个PCGs以TTG起始(和)。所有tRNAs都具有典型的三叶草二级结构,但其中一些存在个别碱基错配。基于13个PCGs的串联核苷酸序列,使用贝叶斯推断和最大似然法进行的系统发育分析支持长蝽科的单系性。结果表明,该属物种与其他九个长蝽科物种聚类。本研究包括首次对两个窄缘长蝽属物种的线粒体基因组进行完整测序,这将为研究长蝽科在长蝽总科中的系统发育位置以及重建蝽次目的系统发育关系提供重要数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03bb/10273010/53947d32f024/zookeys-1166-141_article-104103__-g001.jpg

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