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基于蛋白质组学的 APCS 鉴定为诊断抗结核药物性肝损伤患者的候选蛋白。

Proteomic-based identification of APCS as candidate protein for diagnosis of patients exhibiting anti-tubercular drug induced liver injury.

机构信息

Department of Biochemistry, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012, India.

Department of Gastroenterology, Postgraduate Institute of Medical Education and Research, Chandigarh, 160012, India.

出版信息

Sci Rep. 2023 Jun 22;13(1):10135. doi: 10.1038/s41598-023-35930-x.

Abstract

Traditional markers evaluate anti-tubercular drug-induced liver injury (AT-DILI). However, these markers have certain limitations and studies are in progress to characterize AT-DILI at an early stage. In the present study, 40 patients were categorized and equally distributed into healthy controls, newly diagnosed tuberculosis (TB), TB without hepatotoxicity and TB with hepatotoxicity groups based on their conventional liver function tests. Relative protein quantification was performed on depleted pooled serum samples of each representative group by LC-MS/MS, and validation of shortlisted protein was done by ELISA. Levels of all analysed biochemical parameters showed a statistical increment in the hepatotoxicity group compared to the other three groups, representing AT-DILI. Comparative proteomic analysis between TB with hepatotoxicity versus TB without hepatotoxicity groups highlighted 24 significant differentially expressed proteins, including PROS1, KNG1, CFH, LCAT, APCS and ADIPOQ. Identified proteins were involved in complement activation, triglyceride-rich lipoprotein particle remodelling and pathways comprising complement, coagulation cascades and cholesterol metabolism. Based on functional relevance, the serum amyloid P component (APCS) was shortlisted for validation, and it showed a similar trend as observed in the discovery phase with 100% sensitivity and 87% specificity; however, findings need exploration in larger cohorts.

摘要

传统标志物可评估抗结核药物性肝损伤(AT-DILI)。然而,这些标志物存在一定局限性,目前正在研究如何在早期阶段对 AT-DILI 进行特征描述。本研究中,根据常规肝功能检查结果,将 40 例患者分为健康对照组、新诊断结核病(TB)组、无肝毒性 TB 组和有肝毒性 TB 组。采用 LC-MS/MS 对每个代表性组的耗竭血清池样本进行相对蛋白定量,并通过 ELISA 对候选蛋白进行验证。与其他三组相比,有肝毒性组的所有分析生化参数水平均显示出统计学上的增加,代表 AT-DILI。有肝毒性 TB 与无肝毒性 TB 组之间的比较蛋白质组学分析突出了 24 个差异表达的显著蛋白,包括 PROS1、KNG1、CFH、LCAT、APCS 和 ADIPOQ。鉴定出的蛋白参与补体激活、富含甘油三酯的脂蛋白颗粒重塑以及补体、凝血级联和胆固醇代谢途径。基于功能相关性,血清淀粉样蛋白 P 成分(APCS)被选为验证候选蛋白,其结果与发现阶段的趋势一致,具有 100%的敏感性和 87%的特异性;然而,这些发现需要在更大的队列中进行探索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8070/10287637/e4e54f265ec0/41598_2023_35930_Fig1_HTML.jpg

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