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2020 年 COVID-19 疫情第一波期间芬兰 SARS-CoV-2 感染漏报情况——基于一系列血清学调查的贝叶斯推断。

Underreporting of SARS-CoV-2 infections during the first wave of the 2020 COVID-19 epidemic in Finland-Bayesian inference based on a series of serological surveys.

机构信息

Finnish Institute for Health and Welfare, Helsinki, Finland.

University of Helsinki, Helsinki, Finland.

出版信息

PLoS One. 2023 Jun 23;18(6):e0282094. doi: 10.1371/journal.pone.0282094. eCollection 2023.

Abstract

In Finland, the first wave of the COVID-19 epidemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) took place from March to June 2020, with the majority of COVID-19 cases diagnosed in the Helsinki-Uusimaa region. The magnitude and trend in the incidence of COVID-19 is one way to monitor the course of the epidemic. The diagnosed COVID-19 cases are a subset of the infections and therefore the COVID-19 incidence underestimates the SARS-CoV-2 incidence. The likelihood that an individual with SARS-CoV-2 infection is diagnosed with COVID-19 depends on the clinical manifestation as well as the infection testing policy and capacity. These factors may fluctuate over time and the underreporting of infections changes accordingly. Quantifying the extent of underreporting allows the assessment of the true incidence of infection. To obtain information on the incidence of SARS-CoV-2 infection in Finland, a series of serological surveys was initiated in April 2020. We develop a Bayesian inference approach and apply it to data from the serological surveys, registered COVID-19 cases, and external data on antibody development, to estimate the time-dependent underreporting of SARS-Cov-2 infections during the first wave of the COVID-19 epidemic in Finland. During the entire first wave, there were 1 to 5 (95% probability) SARS-CoV-2 infections for every COVID-19 case. The underreporting was highest before April when there were 4 to 17 (95% probability) infections for every COVID-19 case. It is likely that between 0.5%-1.0% (50% probability) and no more than 1.5% (95% probability) of the adult population in the Helsinki-Uusimaa region were infected with SARS-CoV-2 by the beginning of July 2020.

摘要

在芬兰,由严重急性呼吸综合征冠状病毒 2 (SARS-CoV-2)引起的 COVID-19 疫情的第一波发生在 2020 年 3 月至 6 月,大多数 COVID-19 病例发生在赫尔辛基-乌西玛大区。COVID-19 的发病率及其趋势是监测疫情进程的一种方式。诊断出的 COVID-19 病例只是感染病例的一部分,因此 COVID-19 的发病率低估了 SARS-CoV-2 的发病率。个体感染 SARS-CoV-2 并被诊断出 COVID-19 的可能性取决于临床表现以及感染检测政策和能力。这些因素可能会随时间而波动,感染的漏报也会相应变化。定量评估漏报程度可以评估感染的真实发病率。为了获得有关芬兰 SARS-CoV-2 感染发病率的信息,2020 年 4 月启动了一系列血清学调查。我们开发了一种贝叶斯推断方法,并将其应用于血清学调查、登记的 COVID-19 病例以及外部关于抗体产生的数据,以估计芬兰 COVID-19 疫情第一波期间 SARS-CoV-2 感染的时变漏报情况。在整个第一波疫情期间,每例 COVID-19 病例对应 1 到 5 例(95%概率)SARS-CoV-2 感染。在 4 月之前,漏报率最高,每例 COVID-19 病例对应 4 到 17 例感染(95%概率)。在 2020 年 7 月初,赫尔辛基-乌西玛大区的成年人口中,很可能有 0.5%-1.0%(50%概率)的人感染了 SARS-CoV-2,不超过 1.5%(95%概率)的人感染了 SARS-CoV-2。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b952/10289354/fa8fb3768edf/pone.0282094.g001.jpg

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