• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

定量蛋白质组学鉴定非小细胞肺癌患者的肿瘤基质组特征。

Quantitative proteomics identifies tumour matrisome signatures in patients with non-small cell lung cancer.

作者信息

Titmarsh Helen F, von Kriegsheim Alex, Wills Jimi C, O'Connor Richard A, Dhaliwal Kevin, Frame Margaret C, Pattle Samuel B, Dorward David A, Byron Adam, Akram Ahsan R

机构信息

The EPSRC and MRC Centre for Doctoral Training in Optical Medical Imaging, Queen's Medical Research Institute, University of Edinburgh, Edinburgh Bioquarter, Edinburgh, United Kingdom.

Centre for Inflammation Research, Queen's Medical Research Institute, University of Edinburgh, Edinburgh Bioquarter, Edinburgh, United Kingdom.

出版信息

Front Oncol. 2023 Jun 16;13:1194515. doi: 10.3389/fonc.2023.1194515. eCollection 2023.

DOI:10.3389/fonc.2023.1194515
PMID:37397358
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10313119/
Abstract

INTRODUCTION

The composition and remodelling of the extracellular matrix (ECM) are important factors in the development and progression of cancers, and the ECM is implicated in promoting tumour growth and restricting anti-tumour therapies through multiple mechanisms. The characterisation of differences in ECM composition between normal and diseased tissues may aid in identifying novel diagnostic markers, prognostic indicators and therapeutic targets for drug development.

METHODS

Using tissue from non-small cell lung cancer (NSCLC) patients undergoing curative intent surgery, we characterised quantitative tumour-specific ECM proteome signatures by mass spectrometry.

RESULTS

We identified 161 matrisome proteins differentially regulated between tumour tissue and nearby non-malignant lung tissue, and we defined a collagen hydroxylation functional protein network that is enriched in the lung tumour microenvironment. We validated two novel putative extracellular markers of NSCLC, the collagen cross-linking enzyme peroxidasin and a disintegrin and metalloproteinase with thrombospondin motifs 16 (ADAMTS16), for discrimination of malignant and non-malignant lung tissue. These proteins were up-regulated in lung tumour samples, and high and gene expression was associated with shorter survival of lung adenocarcinoma and squamous cell carcinoma patients, respectively.

DISCUSSION

These data chart extensive remodelling of the lung extracellular niche and reveal tumour matrisome signatures in human NSCLC.

摘要

引言

细胞外基质(ECM)的组成和重塑是癌症发生发展的重要因素,ECM通过多种机制促进肿瘤生长并限制抗肿瘤治疗。表征正常组织与病变组织之间ECM组成的差异可能有助于识别新的诊断标志物、预后指标和药物开发的治疗靶点。

方法

我们使用接受根治性手术的非小细胞肺癌(NSCLC)患者的组织,通过质谱分析表征了定量的肿瘤特异性ECM蛋白质组特征。

结果

我们鉴定出161种在肿瘤组织和附近非恶性肺组织之间差异调节的基质体蛋白,并定义了一个在肺肿瘤微环境中富集的胶原羟基化功能蛋白网络。我们验证了两种新的NSCLC假定细胞外标志物,胶原交联酶过氧化物酶和含血小板反应蛋白基序的解整合素和金属蛋白酶16(ADAMTS16),用于区分恶性和非恶性肺组织。这些蛋白在肺肿瘤样本中上调,高 和 基因表达分别与肺腺癌和鳞状细胞癌患者的较短生存期相关。

讨论

这些数据描绘了肺细胞外生态位的广泛重塑,并揭示了人类NSCLC中的肿瘤基质体特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/29422639a8b3/fonc-13-1194515-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/2a3a684c1b12/fonc-13-1194515-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/d0086fe952dc/fonc-13-1194515-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/4914244caca9/fonc-13-1194515-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/29422639a8b3/fonc-13-1194515-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/2a3a684c1b12/fonc-13-1194515-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/d0086fe952dc/fonc-13-1194515-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/4914244caca9/fonc-13-1194515-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e6a6/10313119/29422639a8b3/fonc-13-1194515-g004.jpg

相似文献

1
Quantitative proteomics identifies tumour matrisome signatures in patients with non-small cell lung cancer.定量蛋白质组学鉴定非小细胞肺癌患者的肿瘤基质组特征。
Front Oncol. 2023 Jun 16;13:1194515. doi: 10.3389/fonc.2023.1194515. eCollection 2023.
2
SWATH mass spectrometry as a tool for quantitative profiling of the matrisome.SWATH 质谱分析作为基质组定量分析的工具。
J Proteomics. 2018 Oct 30;189:11-22. doi: 10.1016/j.jprot.2018.02.026. Epub 2018 Mar 1.
3
Matrisome analysis of NSCLC unveils clinically-important cancer-associated extracellular matrix changes.非小细胞肺癌的基质组分析揭示了临床上重要的癌症相关细胞外基质变化。
Biochim Biophys Acta Mol Basis Dis. 2025 Apr;1871(4):167709. doi: 10.1016/j.bbadis.2025.167709. Epub 2025 Feb 11.
4
Quantitative proteomic characterization of the lung extracellular matrix in chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis.慢性阻塞性肺疾病和特发性肺纤维化肺细胞外基质的定量蛋白质组学特征。
J Proteomics. 2018 Oct 30;189:23-33. doi: 10.1016/j.jprot.2018.02.027. Epub 2018 Mar 1.
5
A pan-cancer analysis of matrisome proteins reveals CTHRC1 and a related network as major ECM regulators across cancers.癌症图谱分析基质蛋白揭示 CTNRC1 及其相关网络作为癌症中主要的细胞外基质调节因子。
PLoS One. 2022 Oct 3;17(10):e0270063. doi: 10.1371/journal.pone.0270063. eCollection 2022.
6
Targets in the Tumour Matrisome to Promote Cancer Therapy Response.肿瘤基质组中促进癌症治疗反应的靶点。
Cancers (Basel). 2024 May 11;16(10):1847. doi: 10.3390/cancers16101847.
7
Proteomics analysis of the matrisome from MC38 experimental mouse liver metastases.从 MC38 实验性小鼠肝转移模型中分析基质组
Am J Physiol Gastrointest Liver Physiol. 2019 Nov 1;317(5):G625-G639. doi: 10.1152/ajpgi.00014.2019. Epub 2019 Sep 23.
8
Identification of tyrosine brominated extracellular matrix proteins in normal and fibrotic lung tissues.鉴定正常和纤维化肺组织中的酪氨酸溴化细胞外基质蛋白。
Redox Biol. 2024 May;71:103102. doi: 10.1016/j.redox.2024.103102. Epub 2024 Feb 23.
9
Extracellular matrix alterations in low-grade lung adenocarcinoma compared with normal lung tissue by imaging mass spectrometry.成像质谱分析比较低级别肺腺癌与正常肺组织细胞外基质的改变。
J Mass Spectrom. 2020 Apr;55(4):e4450. doi: 10.1002/jms.4450. Epub 2020 Feb 21.
10
Decellularized extracellular matrix from bovine ovarian tissue maintains the protein composition of the native matrisome.来自牛卵巢组织的脱细胞细胞外基质维持了天然基质体的蛋白质组成。
J Proteomics. 2025 Jan 16;311:105347. doi: 10.1016/j.jprot.2024.105347. Epub 2024 Nov 7.

引用本文的文献

1
Integrated bioinformatics analysis screened the key genes and pathways of idiopathic pulmonary fibrosis.综合生物信息学分析筛选出特发性肺纤维化的关键基因和通路。
Sci Rep. 2025 Apr 25;15(1):14448. doi: 10.1038/s41598-025-97037-9.
2
PXDN as a pan-cancer biomarker and promotes tumor progress via immune inhibition in nasopharyngeal carcinoma.PXDN作为一种泛癌生物标志物,通过免疫抑制促进鼻咽癌的肿瘤进展。
Front Oncol. 2024 Sep 27;14:1463011. doi: 10.3389/fonc.2024.1463011. eCollection 2024.
3
Cancer-associated fibroblasts expressing fibroblast activation protein and podoplanin in non-small cell lung cancer predict poor clinical outcome.

本文引用的文献

1
Air pollution particles hijack peroxidasin to disrupt immunosurveillance and promote lung cancer.空气污染颗粒劫持过氧化物酶以扰乱免疫监视并促进肺癌。
Elife. 2022 Apr 19;11:e75345. doi: 10.7554/eLife.75345.
2
DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update).DAVID:一个用于基因列表功能富集分析和功能注释的网络服务器(2021 更新)。
Nucleic Acids Res. 2022 Jul 5;50(W1):W216-W221. doi: 10.1093/nar/gkac194.
3
Pseudohypoxic HIF pathway activation dysregulates collagen structure-function in human lung fibrosis.
非小细胞肺癌中表达成纤维细胞激活蛋白和 podoplanin 的癌相关成纤维细胞预示着不良的临床结局。
Br J Cancer. 2024 May;130(11):1758-1769. doi: 10.1038/s41416-024-02671-1. Epub 2024 Apr 6.
假性低氧性缺氧诱导因子(HIF)通路激活会破坏人肺纤维化中胶原蛋白的结构与功能。
Elife. 2022 Feb 21;11:e69348. doi: 10.7554/eLife.69348.
4
Tissue, age, sex, and disease patterns of matrisome expression in GTEx transcriptome data.GTEx 转录组数据中基质表达的组织、年龄、性别和疾病模式。
Sci Rep. 2021 Nov 3;11(1):21549. doi: 10.1038/s41598-021-00943-x.
5
Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation.专为医学研究量身定制的基于网络的生存分析工具(KMplot):开发与应用
J Med Internet Res. 2021 Jul 26;23(7):e27633. doi: 10.2196/27633.
6
TNMplot.com: A Web Tool for the Comparison of Gene Expression in Normal, Tumor and Metastatic Tissues.TNMplot.com:一个用于比较正常、肿瘤和转移组织中基因表达的网络工具。
Int J Mol Sci. 2021 Mar 5;22(5):2622. doi: 10.3390/ijms22052622.
7
Quantitative proteomic profiling of extracellular matrix and site-specific collagen post-translational modifications in an model of lung fibrosis.肺纤维化模型中细胞外基质的定量蛋白质组学分析及位点特异性胶原蛋白的翻译后修饰
Matrix Biol Plus. 2019 Apr 13;1:100005. doi: 10.1016/j.mbplus.2019.04.002. eCollection 2019 Feb.
8
Proteomic Analyses Identify Differentially Expressed Proteins and Pathways Between Low-Risk and High-Risk Subtypes of Early-Stage Lung Adenocarcinoma and Their Prognostic Impacts.蛋白质组学分析鉴定出早期肺腺癌低风险和高风险亚型之间差异表达的蛋白质和途径及其预后影响。
Mol Cell Proteomics. 2021;20:100015. doi: 10.1074/mcp.RA120.002384. Epub 2021 Jan 26.
9
Collagen promotes anti-PD-1/PD-L1 resistance in cancer through LAIR1-dependent CD8 T cell exhaustion.胶原通过 LAIR1 依赖性 CD8 T 细胞耗竭促进癌症对 PD-1/PD-L1 的耐药性。
Nat Commun. 2020 Sep 9;11(1):4520. doi: 10.1038/s41467-020-18298-8.
10
Skin proteomics - analysis of the extracellular matrix in health and disease.皮肤蛋白质组学——健康与疾病中细胞外基质的分析。
Expert Rev Proteomics. 2020 May;17(5):377-391. doi: 10.1080/14789450.2020.1773261. Epub 2020 Jun 19.