Department of Chemistry, Yildiz Technical University, 34220, Istanbul, Turkey.
J Mol Model. 2023 Jul 3;29(8):222. doi: 10.1007/s00894-023-05636-y.
Degradation reactions of micropollutants such as antibiotics with OH radicals are very important in terms of environmental pollution. Therefore, in this study, the degradation kinetic mechanism of 6-aminopenicillanic acid (6-APA) with OH radical was investigated by density functional theory (DFT) methods.
For the calculations, different functionals such as B3LYP, MPW1PW91, and M06-2X were used with a 6-31 g(d,p) basis set. The aquatic effect on the reaction mechanism was investigated by conductor-like polarizable continuum model (CPCM). For the degradation kinetics in aqueous media, the addition of explicit water molecules was also calculated. Subsequent reaction mechanism for the most probable reaction product was briefly discussed.
Among the functionals used, B3LYP results were consistent with the experimental results. Calculated kinetic parameters indicated that the OH-addition path was more dominant than the H-abstraction paths. With the increase of explicit water molecules in the models, the energy required for the formation of transition state complexes decreased. The overall rate constant is calculated as 2.28 × 10 M s at 298 K for the titled reaction.
羟基自由基(OH 自由基)引发的抗生素等微污染物的降解反应对于环境污染而言非常重要。因此,在本研究中,通过密度泛函理论(DFT)方法研究了 6-氨基青霉烷酸(6-APA)与 OH 自由基的降解动力学机制。
对于计算,使用了不同的函数,如 B3LYP、MPW1PW91 和 M06-2X,以及 6-31g(d,p)基组。通过电可极化连续模型(CPCM)研究了水相环境对反应机制的影响。对于水相中的降解动力学,还计算了显式水分子的添加。简要讨论了最可能的反应产物的后续反应机制。
在所使用的函数中,B3LYP 的结果与实验结果一致。计算的动力学参数表明,OH 加成路径比 H 抽提路径更占优势。随着模型中显式水分子的增加,形成过渡态复合物所需的能量降低。对于标题反应,在 298 K 下,整体速率常数计算为 2.28×10 M s。