• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

环境辅助量子模型研究由于碱基互变异构导致的 RNA-DNA 错误相关性。

Environment assisted quantum model for studying RNA-DNA-error correlation created due to the base tautomery.

机构信息

Department of Energy Engineering, Sharif University of Technology, P.O. Box 11365-9516, Tehran, Iran.

Department of Chemistry, Bu-Ali Sina University, Hamedan, Iran.

出版信息

Sci Rep. 2023 Jul 4;13(1):10788. doi: 10.1038/s41598-023-38019-7.

DOI:10.1038/s41598-023-38019-7
PMID:37402822
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10319750/
Abstract

The adaptive mutation phenomenon has been drawing the attention of biologists for several decades in evolutionist community. In this study, we propose a quantum mechanical model of adaptive mutation based on the implications of the theory of open quantum systems. We survey a new framework that explain how random point mutations can be stabilized and directed to be adapted with the stresses introduced by the environments according to the microscopic rules dictated by constraints of quantum mechanics. We consider a pair of entangled qubits consist of DNA and mRNA pair, each coupled to a distinct reservoir for analyzing the spreed of entanglement using time-dependent perturbation theory. The reservoirs are physical demonstrations of the cytoplasm and nucleoplasm and surrounding environments of mRNA and DNA, respectively. Our predictions confirm the role of the environmental-assisted quantum progression of adaptive mutations. Computing the concurrence as a measure that determines to what extent the bipartite DNA-mRNA can be correlated through entanglement, is given. Preventing the entanglement loss is crucial for controlling unfavorable point mutations under environmental influences. We explore which physical parameters may affect the preservation of entanglement between DNA and mRNA pair systems, despite the destructive role of interaction with the environments.

摘要

自适应突变现象在进化生物学家群体中已经引起了几十年的关注。在这项研究中,我们基于开放量子系统理论的含义,提出了一种自适应突变的量子力学模型。我们调查了一个新的框架,该框架解释了随机点突变如何根据量子力学约束所规定的微观规则,通过环境引入的压力得到稳定和定向适应。我们考虑一对由 DNA 和 mRNA 对组成的纠缠量子位,每个量子位与一个不同的库耦合,以使用含时微扰理论分析纠缠的扩展。库分别是细胞质和核质以及 mRNA 和 DNA 周围环境的物理表现。我们的预测证实了环境辅助的自适应突变量子进展的作用。计算关联度作为确定双联体 DNA-mRNA 通过纠缠相关程度的度量,给出了。防止纠缠丢失对于控制环境影响下不利的点突变至关重要。我们探索了哪些物理参数可能会影响 DNA 和 mRNA 对系统之间的纠缠保存,尽管与环境的相互作用具有破坏性作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/6dc593e6fc9f/41598_2023_38019_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/3e6e3d74a46d/41598_2023_38019_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/24ae118d10ac/41598_2023_38019_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/1c5524cd15c8/41598_2023_38019_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/6dc593e6fc9f/41598_2023_38019_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/3e6e3d74a46d/41598_2023_38019_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/24ae118d10ac/41598_2023_38019_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/1c5524cd15c8/41598_2023_38019_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f1d/10319750/6dc593e6fc9f/41598_2023_38019_Fig4_HTML.jpg

相似文献

1
Environment assisted quantum model for studying RNA-DNA-error correlation created due to the base tautomery.环境辅助量子模型研究由于碱基互变异构导致的 RNA-DNA 错误相关性。
Sci Rep. 2023 Jul 4;13(1):10788. doi: 10.1038/s41598-023-38019-7.
2
Entanglement loss in molecular quantum-dot qubits due to interaction with the environment.由于与环境相互作用导致分子量子点量子比特中的纠缠损失。
J Phys Condens Matter. 2018 May 16;30(19):195602. doi: 10.1088/1361-648X/aab98d. Epub 2018 Mar 26.
3
Entanglement Degradation in Two Interacting Qubits Coupled to Dephasing Environments.耦合到退相干环境的两个相互作用量子比特中的纠缠退化
Entropy (Basel). 2023 Oct 17;25(10):1458. doi: 10.3390/e25101458.
4
Quantum biology and human carcinogenesis.量子生物学与人类致癌作用
Biosystems. 2019 Apr;178:16-24. doi: 10.1016/j.biosystems.2019.01.010. Epub 2019 Jan 26.
5
Author Correction: Environment assisted quantum model for studying RNA-DNA-error correlation created due to the base tautomery.作者更正:用于研究由于碱基互变异构而产生的RNA - DNA错误相关性的环境辅助量子模型。
Sci Rep. 2023 Nov 27;13(1):20852. doi: 10.1038/s41598-023-48156-8.
6
Dephasing-assisted entanglement in a system of strongly coupled qubits.强耦合量子比特系统中的退相辅助纠缠
Opt Express. 2021 Mar 15;29(6):9685-9698. doi: 10.1364/OE.417294.
7
Preparation and measurement of three-qubit entanglement in a superconducting circuit.超导电路中三量子比特纠缠的制备与测量。
Nature. 2010 Sep 30;467(7315):574-8. doi: 10.1038/nature09416.
8
Speeding Up Entanglement Generation by Proximity to Higher-Order Exceptional Points.通过接近高阶例外点加速纠缠生成
Phys Rev Lett. 2023 Sep 8;131(10):100202. doi: 10.1103/PhysRevLett.131.100202.
9
Analysis of entanglement measures and LOCC maximized quantum Fisher information of general two qubit systems.一般两量子比特系统的纠缠度量与局域操作和经典通信(LOCC)最大化量子 Fisher 信息的分析
Sci Rep. 2014 Jun 24;4:5422. doi: 10.1038/srep05422.
10
Multistage entanglement swapping using superconducting qubits in the absence and presence of dissipative environment without Bell state measurement.在不存在和存在耗散环境且无需贝尔态测量的情况下,使用超导量子比特进行多阶段纠缠交换
Sci Rep. 2023 Sep 28;13(1):16342. doi: 10.1038/s41598-023-43592-y.

本文引用的文献

1
Proton transfer during DNA strand separation as a source of mutagenic guanine-cytosine tautomers.DNA链分离过程中的质子转移作为诱变鸟嘌呤-胞嘧啶互变异构体的来源。
Commun Chem. 2022 Nov 5;5(1):144. doi: 10.1038/s42004-022-00760-x.
2
The Role of Proton Transfer on Mutations.质子转移在突变中的作用。
Front Chem. 2019 Aug 21;7:536. doi: 10.3389/fchem.2019.00536. eCollection 2019.
3
A quantum mechanical approach towards the calculation of transition probabilities between DNA codons.一种用于计算DNA密码子之间跃迁概率的量子力学方法。
Biosystems. 2019 Oct;184:103988. doi: 10.1016/j.biosystems.2019.103988. Epub 2019 Jul 5.
4
Validity Examination of the Dissipative Quantum Model of Olfaction.嗅探耗散量子模型的有效性检验。
Sci Rep. 2017 Jun 30;7(1):4432. doi: 10.1038/s41598-017-04846-8.
5
Inverse Temperature Dependence of Nuclear Quantum Effects in DNA Base Pairs.DNA碱基对中核量子效应的逆温度依赖性
J Phys Chem Lett. 2016 Jun 2;7(11):2125-31. doi: 10.1021/acs.jpclett.6b00777. Epub 2016 May 24.
6
Assessing the importance of proton transfer reactions in DNA.评估质子转移反应在 DNA 中的重要性。
Acc Chem Res. 2014 Aug 19;47(8):2467-74. doi: 10.1021/ar500148c. Epub 2014 May 21.
7
Coherence and decoherence in biological systems: principles of noise-assisted transport and the origin of long-lived coherences.生物系统中的相干与退相干:噪声辅助输运原理和长寿命相干的起源。
Philos Trans A Math Phys Eng Sci. 2012 Aug 13;370(1972):3638-57. doi: 10.1098/rsta.2011.0224.
8
Structure-based model of the stepping motor of PcrA helicase.基于结构的PcrA解旋酶步进电机模型。
Biophys J. 2006 Sep 15;91(6):2097-114. doi: 10.1529/biophysj.106.088203. Epub 2006 Jun 30.
9
The incorporation of quantum effects in enzyme kinetics modeling.量子效应在酶动力学建模中的纳入。
Acc Chem Res. 2002 Jun;35(6):341-9. doi: 10.1021/ar0100226.
10
Quantum mechanical methods for enzyme kinetics.酶动力学的量子力学方法。
Annu Rev Phys Chem. 2002;53:467-505. doi: 10.1146/annurev.physchem.53.091301.150114. Epub 2001 Oct 4.