Department of Biochemistry and Biophysics, Oregon State University, Corvallis, OR 97331, USA.
Department of Chemical Engineering, Oregon State University, Corvallis, OR 97331, USA.
J Mol Biol. 2023 Sep 1;435(17):168193. doi: 10.1016/j.jmb.2023.168193. Epub 2023 Jul 3.
Dysferlin is a large membrane protein found most prominently in striated muscle. Loss of dysferlin activity is associated with reduced exocytosis, abnormal intracellular Ca2+ and the muscle diseases limb-girdle muscular dystrophy and Miyoshi myopathy. The cytosolic region of dysferlin consists of seven C2 domains with mutations in the C2A domain at the N-terminus resulting in pathology. Despite the importance of Ca2+ and membrane binding activities of the C2A domain for dysferlin function, the mechanism of the domain remains poorly characterized. In this study we find that the C2A domain preferentially binds membranes containing PI(4,5)P2 through an interaction mediated by residues Y23, K32, K33, and R77 on the concave face of the domain. We also found that subsequent to membrane binding, the C2A domain inserts residues on the Ca2+ binding loops into the membrane. Analysis of solution NMR measurements indicate that the domain inhabits two distinct structural states, with Ca2+ shifting the population between states towards a more rigid structure with greater affinity for PI(4,5)P2. Based on our results, we propose a mechanism where Ca converts C2A from a structurally dynamic, low PI(4,5)P2 affinity state to a high affinity state that targets dysferlin to PI(4,5)P2 enriched membranes through interaction with Tyr23, K32, K33, and R77. Binding also involves changes in lipid packing and insertion by the third Ca2+ binding loop of the C2 domain into the membrane, which would contribute to dysferlin function in exocytosis and Ca2+ regulation.
肌营养不良蛋白是一种主要存在于横纹肌中的大型膜蛋白。肌营养不良蛋白活性丧失与胞吐作用减少、细胞内 Ca2+ 异常以及肢带型肌营养不良症和宫泽肌病等肌肉疾病有关。肌营养不良蛋白的胞质区域由七个 C2 结构域组成,其 N 端的 C2A 结构域的突变导致了病变。尽管 C2A 结构域的 Ca2+ 和膜结合活性对肌营养不良蛋白功能很重要,但该结构域的机制仍知之甚少。在这项研究中,我们发现 C2A 结构域通过该结构域凹面残基 Y23、K32、K33 和 R77 介导的相互作用,优先与含有 PI(4,5)P2 的膜结合。我们还发现,在与膜结合后,C2A 结构域将 Ca2+ 结合环上的残基插入到膜中。溶液 NMR 测量分析表明,该结构域存在两种不同的结构状态,Ca2+ 将结构状态之间的种群转移到具有更高刚性和对 PI(4,5)P2 更高亲和力的结构状态。基于我们的结果,我们提出了一种机制,即 Ca2+ 将 C2A 从结构动态、低 PI(4,5)P2 亲和力状态转换为高亲和力状态,通过与 Tyr23、K32、K33 和 R77 的相互作用,将肌营养不良蛋白靶向到富含 PI(4,5)P2 的膜上。结合还涉及脂质包装的变化和 C2 结构域的第三个 Ca2+ 结合环插入到膜中,这将有助于肌营养不良蛋白在胞吐作用和 Ca2+ 调节中的功能。