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全外显子组测序在一个伊朗家庭中鉴定出与肌膜蛋白病相关的DYSF基因中的一个获得性终止突变。

Whole Exome Sequencing Identified a Stop-Gained Mutation in DYSF Gene Associated With Dysferlinopathy in an Iranian Family.

作者信息

Baghshomali Saba, Jebelli Asiyeh, Kazemzadeh Mina, Jalalypour Farzaneh, Yazdchi Mohammad, Mokhtarzadeh Amir Ali, Emrahi Leila

机构信息

Department of Biological Sciences, Faculty of Basic Sciences, Higher Education Institute of Rab-Rashid, Tabriz, Iran.

Department of Cell and Molecular Biology, Faculty of Biological Sciences, Kharazmi University, Tehran, Iran.

出版信息

Int J Genomics. 2025 Jul 23;2025:9103068. doi: 10.1155/ijog/9103068. eCollection 2025.

Abstract

Muscular dystrophy (MD) refers to a group of hereditary disorders characterized by progressive muscle degeneration, often caused by a deficiency or insufficient levels of glycoproteins in muscle cell membranes. Mutations in various genes lead to different types of MD, each with distinct clinical manifestations and inheritance patterns. The genetic heterogeneity of MD complicates the identification of the causative genes. This research was conducted to identify the genetic basis of MD in an Iranian family with three affected members. Whole exome sequencing (WES) was performed on a proband who had initially been misdiagnosed with polymyositis. Following the identification of the disease-causing variant via WES, cosegregation analysis was carried out among two affected siblings, the asymptomatic parents, and one unaffected sibling. WES identified a homozygous nonsense variant (c.6001C>T, p.Gln2001Ter) in Exon 53 of the gene, which encodes dysferlin, a transmembrane protein essential for membrane protection and repair following damage. This stop-gain mutation results in a nonfunctional truncated protein lacking the transmembrane helix, preventing its anchorage to the membrane. Dysfunction of dysferlin is associated with limb-girdle muscular dystrophy 2B (LGMD2B) and Miyoshi myopathy. Bioinformatics analyses and clinical findings confirmed the pathogenicity of this variant in a homozygous state, consistent with autosomal recessive inheritance. Furthermore, structural modeling suggested that the mutation significantly disrupts the tertiary structure of dysferlin. Since the disorder onset in the proband and his two affected sisters began in the proximal limb muscles, the condition was classified as LGMD. The study highlights the diagnostic value of WES in accurately identifying disease-causing variants, offering substantial improvements in time and cost efficiency over conventional diagnostic procedures.

摘要

肌肉萎缩症(MD)是指一组遗传性疾病,其特征为进行性肌肉退化,通常由肌细胞膜中糖蛋白水平不足或缺乏所致。各种基因的突变会导致不同类型的MD,每种类型都有独特的临床表现和遗传模式。MD的遗传异质性使得致病基因的鉴定变得复杂。本研究旨在确定一个有三名患病成员的伊朗家庭中MD的遗传基础。对一名最初被误诊为多发性肌炎的先证者进行了全外显子组测序(WES)。通过WES鉴定出致病变异后,对两名患病的兄弟姐妹、无症状的父母和一名未患病的兄弟姐妹进行了共分离分析。WES在该基因的第53外显子中鉴定出一个纯合无义变异(c.6001C>T,p.Gln2001Ter),该基因编码dysferlin,一种对膜损伤后的保护和修复至关重要的跨膜蛋白。这种获得性终止突变导致产生一种缺乏跨膜螺旋的无功能截短蛋白,使其无法锚定在膜上。dysferlin功能障碍与2B型肢带型肌营养不良症(LGMD2B)和宫下肌病相关。生物信息学分析和临床发现证实了该变异在纯合状态下的致病性,符合常染色体隐性遗传。此外,结构建模表明该突变显著破坏了dysferlin的三级结构。由于先证者及其两名患病姐妹的疾病发作始于近端肢体肌肉,因此该病症被归类为LGMD。该研究突出了WES在准确鉴定致病变异方面的诊断价值,与传统诊断程序相比,在时间和成本效率上有显著提高。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/93f9/12310322/629730334630/IJG2025-9103068.001.jpg

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