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插入序列2基序的保守性赋予不同物种的Rev1破坏G-四链体并刺激跨损伤DNA合成的能力。

Conservation of the insert-2 motif confers Rev1 from different species with an ability to disrupt G-quadruplexes and stimulate translesion DNA synthesis.

作者信息

Ketkar Amit, Sewilam Reham S, McCrury Mason J, Hall Jaycelyn S, Bell Ashtyn, Paxton Bethany C, Tripathi Shreyam, Gunderson Julie E C, Eoff Robert L

机构信息

Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences Little Rock AR 72205 USA

Arkansas School for Mathematics, Sciences, and the Arts Hot Springs AR 71901 USA.

出版信息

RSC Chem Biol. 2023 May 11;4(7):466-485. doi: 10.1039/d3cb00027c. eCollection 2023 Jul 5.

DOI:10.1039/d3cb00027c
PMID:37415867
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10320842/
Abstract

In some organisms, the replication of G-quadruplex (G4) structures is supported by the Rev1 DNA polymerase. We previously showed that residues in the insert-2 motif of human Rev1 (hRev1) increased the affinity of the enzyme for G4 DNA and mediated suppression of mutagenic replication near G4 motifs. We have now investigated the conservation of G4-selective properties in Rev1 from other species. We compared Rev1 from (zRev1), (yRev1), and (lRev1) with hRev1, including an insert-2 mutant form of hRev1 (E466A/Y470A or EY). We found that zRev1 retained all of the G4-selective prowess of the human enzyme, but there was a marked attenuation of G4 binding affinity for the EY hRev1 mutant and the two Rev1 proteins lacking insert-2 (yRev1 and lRev1). Perhaps most strikingly, we found that insert-2 was important for disruption of the G4 structure and optimal stimulation of processive DNA synthesis across the guanine-rich motif by DNA polymerase kappa (pol κ). Our findings have implications for how Rev1 might contribute to G4 replication in different species spanning the evolutionary tree - signaling the importance of selection for enzymes with robust G4-selective properties in organisms where these non-B DNA structures may fulfill taxa-specific physiological functions.

摘要

在一些生物体中,G-四链体(G4)结构的复制由Rev1 DNA聚合酶支持。我们之前表明,人类Rev1(hRev1)的插入2基序中的残基增加了该酶对G4 DNA的亲和力,并介导了对G4基序附近诱变复制的抑制。我们现在研究了其他物种Rev1中G4选择性特性的保守性。我们将来自[物种名称1](zRev1)、[物种名称2](yRev1)和[物种名称3](lRev1)的Rev1与hRev1进行了比较,包括hRev1的插入2突变形式(E466A/Y470A或EY)。我们发现zRev1保留了人类酶的所有G4选择性能力,但EY hRev1突变体以及缺少插入2的两种Rev1蛋白(yRev1和lRev1)对G4的结合亲和力明显减弱。也许最引人注目的是,我们发现插入2对于破坏G4结构以及DNA聚合酶κ(pol κ)对富含鸟嘌呤基序的持续性DNA合成的最佳刺激很重要。我们的发现对于Rev1如何在跨越进化树的不同物种中促进G4复制具有启示意义——这表明在这些非B DNA结构可能履行特定分类群生理功能的生物体中,选择具有强大G4选择性特性的酶的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/81e8c370a4ab/d3cb00027c-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/99356a6189a4/d3cb00027c-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/1d3da11a974e/d3cb00027c-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/1ffae7893689/d3cb00027c-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/e1f37597eca2/d3cb00027c-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/b99bed1dc75d/d3cb00027c-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/81e8c370a4ab/d3cb00027c-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/99356a6189a4/d3cb00027c-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/1d3da11a974e/d3cb00027c-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/1ffae7893689/d3cb00027c-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/e1f37597eca2/d3cb00027c-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/b99bed1dc75d/d3cb00027c-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df09/10320842/81e8c370a4ab/d3cb00027c-f6.jpg

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