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miR-21在结直肠癌诊断中的作用:Meta分析与生物信息学

Role of miR-21 in the diagnosis of colorectal cancer: Meta-analysis and bioinformatics.

作者信息

Li Jiaxin, Chen Huili, Sun Guiying, Zhang Xiaoyue, Ye Hua, Wang Peng

机构信息

College of Public Health, Zhengzhou University, Zhengzhou 450001, Henan Province, China; Henan Key Laboratory of Tumor Epidemiology and State Key Laboratory of Esophageal Cancer Prevention & Treatment, Zhengzhou University, Zhengzhou 450052, Henan Province, China.

College of Public Health, Zhengzhou University, Zhengzhou 450001, Henan Province, China; Henan Key Laboratory of Tumor Epidemiology and State Key Laboratory of Esophageal Cancer Prevention & Treatment, Zhengzhou University, Zhengzhou 450052, Henan Province, China.

出版信息

Pathol Res Pract. 2023 Aug;248:154670. doi: 10.1016/j.prp.2023.154670. Epub 2023 Jul 3.

Abstract

Advanced colorectal cancer (CRC) has a bad prognosis and is challenging to cure. Therefore, there is an urgent need for an effective early diagnosis marker. MicroRNA-21 (miR-21) regulates the expression of multiple cancer target genes. The objective of this study was to assess the diagnostic role of miR-21 in CRC.A meta-analysis of PubMed, Cochrane Library, EMBASE, and Web of Science databases was performed with a carefully designed search strategy to identify records related to the diagnostic role of miR-21 in CRC. TCGA data was used to search for different microRNAs in colorectal cancer samples and surrounding tissues. In addition, potential target genes for miR-21 were predicted and evaluated by functional analysis. We conducted a meta-analysis for 10 studies, including 728 blood samples of patients with CRC and 472 healthy controls. The combined sensitivity and specificity of miR-21 to diagnose colorectal cancer were 0.79 (95% CI: 0.67-0.87) and 0.92 (95% CI: 0.85-0.96), respectively. The combined positive likelihood ratio (PLR) was 10.20 (95% CI: 4.8-21.5), the combined negative likelihood ratio (NLR) was 0.23 (95% CI: 0.14-0.37), the diagnostic odds ratio (DOR) was 45.00 (95% CI:15-132), the area under the summary receiver operating characteristic curve (SROC) for the included studies was 0.93(95%CI: 0.91-0.95). Simultaneously, TCGA data showed that miR-21 was a differential microRNA in colorectal cancer tissues and adjacent tissues, and it was an up-regulated gene. After verification by three databases, 48 target genes of miR-21 were obtained. Through GO enrichment analysis, it was found that the target genes were mainly distributed in the fiber center, the molecular function was mainly focused on cytokine receptor binding, and the biological process was mainly focused on ubiquitin-dependent protein catabolism mediated by the proteasome. KEGG pathway analysis showed that the target genes were mainly distributed in tumor pathways.

摘要

晚期结直肠癌(CRC)预后较差,难以治愈。因此,迫切需要一种有效的早期诊断标志物。微小RNA-21(miR-21)可调节多个癌症靶基因的表达。本研究的目的是评估miR-21在结直肠癌中的诊断作用。采用精心设计的检索策略,对PubMed、Cochrane图书馆、EMBASE和Web of Science数据库进行荟萃分析,以识别与miR-21在结直肠癌中的诊断作用相关的记录。利用TCGA数据在结直肠癌样本和周围组织中搜索不同的微小RNA。此外,通过功能分析预测并评估了miR-21的潜在靶基因。我们对10项研究进行了荟萃分析,包括728例结直肠癌患者的血样和472例健康对照。miR-21诊断结直肠癌的合并敏感性和特异性分别为0.79(95%CI:0.67-0.87)和0.92(95%CI:0.85-0.96)。合并阳性似然比(PLR)为10.20(95%CI:4.8-21.),合并阴性似然比(NLR)为0.23(95%CI:??),诊断比值比(DOR)为45.00(95%CI:15-132),纳入研究的汇总受试者工作特征曲线(SROC)下面积为0.93(95%CI:0.91-0.95)。同时,TCGA数据显示miR-21是结直肠癌组织和相邻组织中的差异微小RNA,且为上调基因。经三个数据库验证后,获得了miR-21的48个靶基因。通过GO富集分析发现,靶基因主要分布在纤维中心,分子功能主要集中在细胞因子受体结合,生物学过程主要集中在蛋白酶体介导的泛素依赖性蛋白分解代谢。KEGG通路分析表明,靶基因主要分布在肿瘤通路中。 (注:原文中“NLR”部分95%CI数据缺失,翻译时保留原文格式)

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