Tao Dan, Tan Jueling, Zhang Ningning, Yang Dingyi, Jiang Yong, Zhou Wei, Wang Ying, Wu Yongzhong
Department of Radiation Oncology, Chongqing University Cancer Hospital, Chongqing, China.
Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital, Chongqing, China.
Transl Cancer Res. 2023 Jun 30;12(6):1422-1440. doi: 10.21037/tcr-22-2793. Epub 2023 Jun 7.
The zinc-fingers and homeoboxes (ZHX) family is a group of nuclear homodimeric transcriptional repressors that play an essential role in developing and progressing diverse malignancies. However, the association of ZHX family expression with prognosis and immune infiltration in lung adenocarcinoma (LUAD) is still unclear. The current study aimed to investigate the relationship between ZHX family expression and clinical outcomes and immune infiltration in LUAD patients.
ZHXs family expression was determined by using the Oncomine database and Cancer Cell Line Encyclopedia (CCLE). The impact of ZHXs family expression on prognosis was analyzed by using the Kaplan-Meier-plotter online database. The Search Tool for the Retrieval of Interacting Genes (STRING) database was utilized to construct the interaction network based on the selected differentially expressed genes associated with ZHXs. The Database for Annotation, Visualization, and Integrated Discovery (DAVID) was used to perform the enrichment of the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. The functional state of the ZHXs family in diverse types of malignancies was determined by CancerSEA. The Tumor Immune Estimation Resource (TIMER) database was used to evaluate the association of the ZHXs family with immune cell infiltrates. ZHXs family expression was validated by the Gene Expression Omnibus (GEO) database and real-time polymerase chain reaction (RT-PCR) in 10 paired tumors and normal tissues.
ZHX1-3 expression level significantly decreased in LUAD compared with normal tissues. Attenuated ZHXs expression was significantly associated with unfavorable overall survival in LUAD patients. ZHX family members were positively associated with immune infiltration of monocytes, tumor-associated macrophages (TAMs), M1 and M2 macrophages in LUAD. ZHX family expression was also significantly related to a variety of immune marker sets in LUAD. GEO analysis and RT-PCR validated the significant decrease of ZHXs expression level in LUAD.
The current study revealed that ZHX family expression was significantly correlated with unfavorable outcomes and immune infiltration in LUAD. The findings herein provide a promising basis for further study into the potential biological function of the ZHX family in LUAD and lay a foundation for developing therapeutic targets for LUAD patients.
锌指和同源盒(ZHX)家族是一组核内同源二聚体转录抑制因子,在多种恶性肿瘤的发生和发展中起重要作用。然而,ZHX家族表达与肺腺癌(LUAD)预后及免疫浸润的关系仍不清楚。本研究旨在探讨ZHX家族表达与LUAD患者临床结局及免疫浸润之间的关系。
利用Oncomine数据库和癌细胞系百科全书(CCLE)确定ZHX家族的表达。使用Kaplan-Meier-plotter在线数据库分析ZHX家族表达对预后的影响。利用检索相互作用基因的搜索工具(STRING)数据库,基于与ZHX相关的选定差异表达基因构建相互作用网络。使用注释、可视化和综合发现数据库(DAVID)对基因本体(GO)和京都基因与基因组百科全书(KEGG)通路进行富集分析。通过CancerSEA确定ZHX家族在不同类型恶性肿瘤中的功能状态。利用肿瘤免疫估计资源(TIMER)数据库评估ZHX家族与免疫细胞浸润的相关性。通过基因表达综合数据库(GEO)和实时聚合酶链反应(RT-PCR)在10对肿瘤组织和正常组织中验证ZHX家族的表达。
与正常组织相比,LUAD中ZHX1-3的表达水平显著降低。ZHX家族表达减弱与LUAD患者不良的总生存期显著相关。ZHX家族成员与LUAD中单核细胞、肿瘤相关巨噬细胞(TAM)、M1和M2巨噬细胞的免疫浸润呈正相关。ZHX家族表达也与LUAD中多种免疫标志物集显著相关。GEO分析和RT-PCR验证了LUAD中ZHX家族表达水平的显著降低。
本研究表明,ZHX家族表达与LUAD的不良预后和免疫浸润显著相关。本研究结果为进一步研究ZHX家族在LUAD中的潜在生物学功能提供了有前景的基础,并为开发LUAD患者的治疗靶点奠定了基础。