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新型短稳杆菌无保守二硫键半胱氨酸缺失铜锌超氧化物歧化酶的特性。

Characterization of a novel cysteine-less Cu/Zn-superoxide dismutase in Paenibacillus lautus missing a conserved disulfide bond.

机构信息

Department of Chemistry, Keio University, Yokohama, Japan.

Department of Chemistry, Keio University, Yokohama, Japan.

出版信息

J Biol Chem. 2023 Aug;299(8):105040. doi: 10.1016/j.jbc.2023.105040. Epub 2023 Jul 11.

Abstract

Cu/Zn-superoxide dismutase (CuZnSOD) is an enzyme that binds a copper and zinc ion and also forms an intramolecular disulfide bond. Together with the copper ion as the active site, the disulfide bond is completely conserved among these proteins; indeed, the disulfide bond plays critical roles in maintaining the catalytically competent conformation of CuZnSOD. Here, we found that a CuZnSOD protein in Paenibacillus lautus (PaSOD) has no Cys residue but exhibits a significant level of enzyme activity. The crystal structure of PaSOD revealed hydrophobic and hydrogen-bonding interactions in substitution for the disulfide bond of the other CuZnSOD proteins. Also notably, we determined that PaSOD forms a homodimer through an additional domain with a novel fold at the N terminus. While the advantages of lacking Cys residues and adopting a novel dimer configuration remain obscure, PaSOD does not require a disulfide-introducing/correcting system for maturation and could also avoid misfolding caused by aberrant thiol oxidations under an oxidative environment.

摘要

铜/锌超氧化物歧化酶(CuZnSOD)是一种结合铜和锌离子并形成分子内二硫键的酶。与铜离子作为活性位点一起,这些蛋白质中的二硫键完全保守;事实上,二硫键在维持 CuZnSOD 的催化活性构象中起着关键作用。在这里,我们发现蜡状芽孢杆菌(Paenibacillus lautus)中的一种 CuZnSOD 蛋白没有半胱氨酸残基,但表现出显著的酶活性。PaSOD 的晶体结构揭示了疏水性和氢键相互作用取代了其他 CuZnSOD 蛋白质中二硫键的作用。同样值得注意的是,我们确定 PaSOD 通过在 N 末端具有新颖折叠的额外结构域形成同源二聚体。虽然缺乏半胱氨酸残基和采用新型二聚体构型的优势尚不清楚,但 PaSOD 不需要二硫键引入/修正系统来成熟,并且在氧化环境下也可以避免由异常硫醇氧化引起的错误折叠。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dc1/10432803/b30eb354aa3c/gr1.jpg

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