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转录组分析揭示了参与茶叶‘黔湄419’和‘黔辐4号’铝、铜和镉积累的差异表达基因。

Transcriptome Analysis Reveals Differentially Expressed Genes Involved in Aluminum, Copper and Cadmium Accumulation in Tea 'Qianmei 419' and 'Qianfu 4'.

作者信息

Yao Xinzhuan, Chen Hufang, Zhang Baohui, Lu Litang

机构信息

Institute of Plant Health & Medicine, College of Tea Sciences, Guizhou University, Guiyang 550025, China.

Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.

出版信息

Plants (Basel). 2023 Jul 7;12(13):2580. doi: 10.3390/plants12132580.

Abstract

Tea, as a global nonalcoholic beverage, is widely consumed due to its economic, health and cultural importance. Polyploids have the ability to solve the problems of low yield, cold resistance and insect resistance in tea tree varieties. However, the response mechanism to aluminum and heavy metal remains unclear. In this study, the content of Al, Cu and Cd were measured in the leaves and roots of 'Qianmei 419' and 'Qianfu 4', respectively. The content of Al, Cd and Cu in the roots of the 'Qianmei 419' tea variety were significantly higher than in 'Qianfu 4' roots. Only the content of Cu in the leaves of the 'Qianmei 419' tea variety was significantly higher than that in the roots of the 'Qianfu 4' tea variety. Moreover, we found that the content of Al, Cu and Cd in the soil around the root of 'Qianfu 4' were higher than in the soil around the root of 'Qianmei 419'. RNA-seq was performed to identify the DEGs involved in the accumulation of Al, Cu and Cd between 'Qianmei 419' and 'Qianfu 4'. A total of 23,813 DEGs were identified in the triploid tea variety, including 16,459 upregulated DEGs and 7354 downregulated DEGs. Among them, by analyzing the expression levels of some metal transporter genes, it was found that most of the metal transporter genes were downregulated in the triploid tea plants. In short, through the analysis of transcriptome data and metal content, it was found that changes in metal transporter gene expression affect the accumulation of metals in tea plants. These results provide candidate genes to enhance multi-metal tolerance through genetic engineering technology.

摘要

茶作为一种全球性的非酒精饮料,因其经济、健康和文化重要性而被广泛饮用。多倍体有能力解决茶树品种中产量低、抗寒和抗虫等问题。然而,茶树对铝和重金属的响应机制仍不清楚。在本研究中,分别测定了‘黔湄419’和‘黔辐4号’茶树叶片和根系中铝、铜和镉的含量。‘黔湄419’茶树品种根系中铝、镉和铜的含量显著高于‘黔辐4号’根系。仅‘黔湄419’茶树品种叶片中铜的含量显著高于‘黔辐4号’茶树品种根系中铜的含量。此外,我们发现‘黔辐4号’茶树根系周围土壤中铝、铜和镉的含量高于‘黔湄419’茶树根系周围土壤中相应元素的含量。通过RNA测序来鉴定‘黔湄419’和‘黔辐4号’茶树品种中参与铝、铜和镉积累的差异表达基因(DEGs)。在三倍体茶树品种中总共鉴定出23813个差异表达基因,其中包括16459个上调的差异表达基因和7354个下调的差异表达基因。其中,通过分析一些金属转运蛋白基因的表达水平,发现大多数金属转运蛋白基因在三倍体茶树中表达下调。简而言之,通过对转录组数据和金属含量的分析,发现金属转运蛋白基因表达的变化影响茶树中金属的积累。这些结果为通过基因工程技术提高多金属耐受性提供了候选基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f9b/10346602/7c64c25e5235/plants-12-02580-g001.jpg

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