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远距离基因流动:为受干扰和碎片化种群带来希望。

Long-distance gene flow in : Hope for disturbed and fragmented populations.

作者信息

Omondi Stephen F, Githae Eunice W, Khasa Damase P

机构信息

Department of Forest Genetics and Tree Improvement Kenya Forestry Research Institute Nairobi Kenya.

Department of Biological Sciences Chuka University Chuka Kenya.

出版信息

Ecol Evol. 2023 Jul 12;13(7):e10292. doi: 10.1002/ece3.10292. eCollection 2023 Jul.

Abstract

Even though pollen and seed dispersals are some of the important factors that determine tree species survival across landscapes, gene dispersal data of important tropical dryland tree species such as that are undergoing various population disturbances remain scarce. Understanding patterns of gene dispersal in these ecosystems is important for conservation, landscape restoration and tree improvement. We investigated pollen and seed mediated gene flow in two populations of contrasting state (less disturbed and heavily undisturbed) using nine microsatellites and 128 genotyping-by-sequencing single nucleotide polymorphism (SNPs) multilocus genotypes of two growth stages (juvenile and adult trees) and their spatial locations. We performed parentage assignments using likelihood approach and undertook spatial genetic structure (SGS) analyses for the two growth stages through correlation among kinship coefficients and geographical distances between pair of individuals. The SNPs showed higher resolving power and assignment rates than microsatellites; however, a combination of the two marker-types improved the assignment rate and provided robust parentage assessments. We found evidence of long-distance (up to 210 m) pollination events for both populations; however, the majority of seed dispersal was found closer to the putative maternal parent. On average, parentage analysis showed high amounts of pollen (40%) and seed (20%) immigration in both populations. Significant positive SGS was found only for the adult cohorts in the less disturbed population for distance classes 20 and 40 m, indicating historical short-distance seed dispersals. Our results suggest long-distance gene flow within the species and we recommend conservation of remnant and isolated populations or individual trees to promote genetic connectivity.

摘要

尽管花粉和种子传播是决定树木物种在不同景观中生存的一些重要因素,但诸如那些正在经历各种种群干扰的重要热带旱地树种的基因传播数据仍然稀缺。了解这些生态系统中的基因传播模式对于保护、景观恢复和树木改良至关重要。我们使用九个微卫星以及两个生长阶段(幼树和成年树)及其空间位置的128个测序基因分型单核苷酸多态性(SNP)多位点基因型,研究了两个状态对比鲜明(较少干扰和严重未受干扰)的种群中花粉和种子介导的基因流动。我们使用似然方法进行亲本分配,并通过亲缘系数与个体对之间地理距离的相关性,对两个生长阶段进行空间遗传结构(SGS)分析。SNP显示出比微卫星更高的分辨能力和分配率;然而,两种标记类型的组合提高了分配率,并提供了可靠的亲本评估。我们发现两个种群都存在远距离(高达210米)授粉事件的证据;然而,大多数种子传播发生在推定母本附近。平均而言,亲本分析表明两个种群中都有大量的花粉(40%)和种子(20%)迁入。仅在较少干扰种群的成年队列中,对于20米和40米的距离类别发现了显著的正SGS,表明历史上存在短距离种子传播。我们的结果表明该物种内存在远距离基因流动,我们建议保护残余和孤立的种群或单株树木以促进遗传连通性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d39e/10337015/a3a175b5e8c1/ECE3-13-e10292-g002.jpg

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