Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, New York, United States of America.
Herbert Irving Comprehensive Cancer Center, Columbia University Medical Center, New York, New York, United States of America.
PLoS Comput Biol. 2023 Jul 17;19(7):e1011278. doi: 10.1371/journal.pcbi.1011278. eCollection 2023 Jul.
Coronavirus disease 2019 (COVID-19) will likely remain a major public health burden; accurate forecast of COVID-19 epidemic outcomes several months into the future is needed to support more proactive planning. Here, we propose strategies to address three major forecast challenges, i.e., error growth, the emergence of new variants, and infection seasonality. Using these strategies in combination we generate retrospective predictions of COVID-19 cases and deaths 6 months in the future for 10 representative US states. Tallied over >25,000 retrospective predictions through September 2022, the forecast approach using all three strategies consistently outperformed a baseline forecast approach without these strategies across different variant waves and locations, for all forecast targets. Overall, probabilistic forecast accuracy improved by 64% and 38% and point prediction accuracy by 133% and 87% for cases and deaths, respectively. Real-time 6-month lead predictions made in early October 2022 suggested large attack rates in most states but a lower burden of deaths than previous waves during October 2022 -March 2023; these predictions are in general accurate compared to reported data. The superior skill of the forecast methods developed here demonstrate means for generating more accurate long-lead forecast of COVID-19 and possibly other infectious diseases.
2019 年冠状病毒病(COVID-19)可能仍是一个主要的公共卫生负担;需要对未来几个月的 COVID-19 疫情结果进行准确预测,以支持更积极主动的规划。在这里,我们提出了应对三个主要预测挑战的策略,即误差增长、新变体的出现和感染季节性。我们结合使用这些策略,对 10 个美国代表性州未来 6 个月的 COVID-19 病例和死亡人数进行了回顾性预测。通过 2022 年 9 月前汇总的>25,000 次回顾性预测,使用所有三种策略的预测方法在不同的变体波和地点均优于没有这些策略的基线预测方法,所有预测指标均如此。总体而言,病例和死亡的概率预测准确性分别提高了 64%和 38%,点预测准确性分别提高了 133%和 87%。2022 年 10 月初进行的实时 6 个月前瞻性预测表明,大多数州的发病率较高,但 2022 年 10 月至 2023 年 3 月期间的死亡人数低于前几波;与报告数据相比,这些预测总体上是准确的。这里开发的预测方法的优越技能证明了生成更准确的 COVID-19 及其他传染病长时预测的方法。