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产抗生素群体Pelagophyte 海藻 Chrysophaeum taylorii 的基因组揭示了次级代谢的多样化和非典型能力。

The genome of antibiotic-producing colonies of the Pelagophyte alga Chrysophaeum taylorii reveals a diverse and non-canonical capacity for secondary metabolism.

机构信息

Laboratory of Bioorganic Chemistry, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Mailstop 0820, Bethesda, MD, 20892, USA.

LifeMine Therapeutics, 30 Acorn Park Dr., Cambridge, MA, 02140, USA.

出版信息

Sci Rep. 2023 Jul 24;13(1):11944. doi: 10.1038/s41598-023-38042-8.

DOI:10.1038/s41598-023-38042-8
PMID:37488207
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10366177/
Abstract

Chrysophaeum taylorii is a member of an understudied clade of marine algae that can be responsible for harmful coastal blooms and is known to accumulate bioactive natural products including antibiotics of the chrysophaentin class. Whole genome sequencing of laboratory-cultivated samples revealed an extensive and diverse complement of secondary metabolite biosynthetic genes in C. taylorii, alongside a small microbiome with a more limited biosynthetic potential. 16S microbiome analysis of laboratory cultured alongside wild-collected samples revealed several common taxa; however, analysis of biosynthetic genes suggested an algal origin for the chrysophaentins, possibly via one of several non-canonical polyketide synthase genes encoded within the genome.

摘要

泰勒角毛藻是海洋藻类中一个研究较少的分支的成员,它可导致有害的沿海水华,并已知积累生物活性天然产物,包括金角毛藻素类抗生素。实验室培养样本的全基因组测序显示,泰勒角毛藻中有大量多样化的次生代谢物生物合成基因,同时还有一个微生物组,其生物合成潜力有限。实验室培养的样本与野外采集的样本的 16S 微生物组分析显示出几个常见的分类群;然而,生物合成基因分析表明,金角毛藻素可能来自藻类,可能是通过基因组内编码的几种非典型聚酮合酶基因之一。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/51ad1c56b648/41598_2023_38042_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/2e5c2bd427c6/41598_2023_38042_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/af41e5be0c3b/41598_2023_38042_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/51ad1c56b648/41598_2023_38042_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/2e5c2bd427c6/41598_2023_38042_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/e5f4b00a1c2d/41598_2023_38042_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/693e6c9a4ceb/41598_2023_38042_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/af41e5be0c3b/41598_2023_38042_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ba8/10366177/51ad1c56b648/41598_2023_38042_Fig5_HTML.jpg

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Commun Biol. 2022 Sep 16;5(1):983. doi: 10.1038/s42003-022-03939-z.
2
Large-scale genome sequencing reveals the driving forces of viruses in microalgal evolution.大规模基因组测序揭示了病毒在微藻进化中的驱动力量。
Cell Host Microbe. 2021 Feb 10;29(2):250-266.e8. doi: 10.1016/j.chom.2020.12.005.
3
New pelagophytes show a novel mode of algal colony development and reveal a perforated theca that may define the class.
新的浮叶藻表现出一种新颖的藻类群体发育模式,并揭示了一个可能定义该类别的有孔的壳。
J Phycol. 2021 Apr;57(2):396-411. doi: 10.1111/jpy.13074. Epub 2020 Dec 1.
4
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline.antiSMASH 5.0:二次代谢产物基因组挖掘管道的更新。
Nucleic Acids Res. 2019 Jul 2;47(W1):W81-W87. doi: 10.1093/nar/gkz310.
5
Diversified secondary metabolite biosynthesis gene repertoire revealed in symbiotic dinoflagellates.共生甲藻中多样化的次生代谢物生物合成基因库的揭示。
Sci Rep. 2019 Feb 4;9(1):1204. doi: 10.1038/s41598-018-37792-0.
6
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Planta. 2019 Mar;249(3):647-661. doi: 10.1007/s00425-018-3028-1. Epub 2018 Oct 19.
8
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Plant J. 2018 Jul;95(2):268-281. doi: 10.1111/tpj.13948. Epub 2018 Jun 5.
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10
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