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基于深度学习的多组学整合模型预测乳腺癌腋窝淋巴结转移。

Deep learning-based multiomics integration model for predicting axillary lymph node metastasis in breast cancer.

机构信息

College of Biomedical Engineering, Taiyuan University of Technology, Jinzhong, Shanxi, 030600, People's Republic of China.

College of Computer Science & Technology, Taiyuan University of Technology, Jinzhong, Shanxi, 030600, People's Republic of China.

出版信息

Future Oncol. 2023 Jun;19(20):1429-1438. doi: 10.2217/fon-2023-0070. Epub 2023 Jul 25.

DOI:10.2217/fon-2023-0070
PMID:37489287
Abstract

To develop a deep learning-based multiomics integration model. Five types of omics data (mRNA, DNA methylation, miRNA, copy number variation and protein expression) were used to build a deep learning-based multiomics integration model a deep neural network, incorporating an attention mechanism that adaptively considers the weights of multiomics features. Compared with other methods, the deep learning-based multiomics integration model achieved remarkable results, with an area under the curve of 0.89 (95% CI: 0.863-0.910). The deep learning-based multiomics integration model achieved promising results and is an effective method for predicting axillary lymph node metastasis in breast cancer.

摘要

为了开发一种基于深度学习的多组学整合模型。 使用五种类型的组学数据(mRNA、DNA 甲基化、miRNA、拷贝数变异和蛋白质表达)构建了一种基于深度学习的多组学整合模型,该模型采用了一种注意力机制的深度神经网络,可以自适应地考虑多组学特征的权重。 与其他方法相比,基于深度学习的多组学整合模型取得了显著的效果,曲线下面积为 0.89(95%CI:0.863-0.910)。 基于深度学习的多组学整合模型取得了有前景的结果,是预测乳腺癌腋窝淋巴结转移的有效方法。

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引用本文的文献

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Brief Bioinform. 2025 Jul 2;26(4). doi: 10.1093/bib/bbaf440.
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A non-invasive preoperative model for predicting sentinel lymph node metastasis in breast cancer using clinical data and MRI.一种利用临床数据和磁共振成像预测乳腺癌前哨淋巴结转移的非侵入性术前模型。
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