State Key Lab of Rice Biology, Zhejiang University, Hangzhou, 310058, China.
Zhejiang Provincial Key Laboratory of Biology of Crop Pathogens and Insects, Zhejiang University, Hangzhou, 310058, China.
Sci Data. 2023 Jul 26;10(1):485. doi: 10.1038/s41597-023-02388-5.
Chouioia cunea Yang 1989 is a parasitic wasp of many lepidopteran insects during their pupal stage, and has been successfully used to control pests such as the fall webworm Hyphantria cunea. Here we reported the chromosome-level genome of C. cunea by using short (MGI-SEQ), long (Oxford Nanopore), chromatin-linked (Hi-C) sequencing reads and transcriptomic data, representing the first chromosome-level genome of parasitic wasps of the family Eulophidae. The total assembly length is 171.99 Mb, containing 6 pesudo-chromosomes with a GC content of 36.89% and the scaffold/contig N50 length of 31.70/26.52 Mb. The BUSCO completeness of the assembly was estimated to be 98.7%. A total of 12,258 protein-coding genes (PCGs), 10,547 3'-UTRs, and 10,671 5'-UTRs were annotated. This high-quality genome is an important step toward a better understanding of the genomes of the Eulophidae (Chalcidoidea), and will serve as a valuable resource for analyses of phylogenetic relationships and the evolution of Hymenoptera.
中华长尾小蜂 1989 年是一种寄生在许多鳞翅目昆虫蛹期的小蜂,已成功用于控制秋幕毛虫、舞毒蛾等害虫。在这里,我们利用短读(MGI-SEQ)、长读(Oxford Nanopore)、染色质连接(Hi-C)测序数据和转录组数据,报道了中华长尾小蜂的染色体水平基因组,这是第一个膜翅目长尾小蜂科的染色体水平基因组。总组装长度为 171.99Mb,包含 6 条假染色体,GC 含量为 36.89%,支架/拼接体 N50 长度分别为 31.70/26.52Mb。组装的 BUSCO 完整性估计为 98.7%。共注释了 12258 个蛋白编码基因(PCGs)、10547 个 3'-UTR 和 10671 个 5'-UTR。这个高质量的基因组是更好地理解长尾小蜂科(Chalcidoidea)基因组的重要一步,也将成为分析系统发育关系和膜翅目进化的宝贵资源。