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吉布提医院环境中耐碳青霉烯类革兰氏阴性菌的出现。

Emergence of Carbapenem-Resistant Gram-Negative Isolates in Hospital Settings in Djibouti.

作者信息

Ragueh Ayan Ali, Aboubaker Mohamed Houmed, Mohamed Sitani Idriss, Rolain Jean-Marc, Diene Seydina M

机构信息

Campus Balbala Croisement RN2-RN5, Université de Djibouti, Djibouti 1904, Djibouti.

MEPHI, IRD, AP-HM, IHU-Méditerranée Infection, Faculté de Pharmacie, Aix-Marseille Universite, 19-21 Boulevard Jean Moulin, CEDEX 05, 13385 Marseille, France.

出版信息

Antibiotics (Basel). 2023 Jun 30;12(7):1132. doi: 10.3390/antibiotics12071132.

Abstract

: The antimicrobial resistance (AMR) of bacteria is increasing rapidly against all classes of antibiotics, with the increasing detection of carbapenem-resistant isolates. However, while growing prevalence has been reported around the world, data on the prevalence of carbapenem resistance in developing countries are fairly limited. In this study, we investigated and determined the resistance rate to carbapenems among multidrug-resistant Gram-negative bacteria (MDR-GNB) isolated in Djibouti and characterized their resistance mechanisms. : Of the 256 isolates, 235 (91.8%) were identified as Gram-negative bacteria (GNB). Of these GNBs, 225 (95.7%) isolates exhibited a multidrug resistance phenotype, and 20 (8.5%) isolates were resistant to carbapenems, including 13 coli, 4 , 2 and 1 . The most predominant GNB in this hospital setting were and species. Carbapenemase genes such as and were identified, respectively, in six and four isolates, whereas the carbapenemase was identified in three , two , one and one . Moreover, three isolates co-hosted and . : A total of 256 clinical strains collected between 2019 and 2020 were identified using matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF). Antibiotic susceptibility testing was performed using disk diffusion and E-test methods. Real-time polymerase chain reaction (RT-PCR), standard PCR and sequencing were used to investigate genes encoding for extended-spectrum-β-lactamases, carbapenemases and colistin resistance genes. : We report, for the first time, the presence of MDR-GNB clinical isolates and the emergence of carbapenem-resistant isolates in Djibouti. In addition to performing antimicrobial susceptibility testing, we recommend phenotypic and molecular screening to track the spread of carbapenemase genes among clinical GNB isolates.

摘要

细菌对各类抗生素的耐药性正在迅速增加,碳青霉烯类耐药菌株的检出率也在上升。然而,尽管世界各地报告的碳青霉烯类耐药性患病率不断上升,但发展中国家碳青霉烯类耐药性患病率的数据相当有限。在本研究中,我们调查并确定了吉布提分离出的多重耐药革兰氏阴性菌(MDR-GNB)对碳青霉烯类的耐药率,并对其耐药机制进行了表征。

在256株分离菌株中,235株(91.8%)被鉴定为革兰氏阴性菌(GNB)。在这些GNB中,225株(95.7%)分离菌株表现出多重耐药表型,20株(8.5%)分离菌株对碳青霉烯类耐药,包括13株大肠杆菌、4株肺炎克雷伯菌、2株鲍曼不动杆菌和1株阴沟肠杆菌。该医院环境中最主要的GNB是肺炎克雷伯菌和鲍曼不动杆菌属。分别在6株和4株肺炎克雷伯菌分离株中鉴定出碳青霉烯酶基因blaKPC和blaNDM,而在3株鲍曼不动杆菌、2株肺炎克雷伯菌、1株阴沟肠杆菌和1株产气肠杆菌中鉴定出碳青霉烯酶blaOXA-48。此外,3株鲍曼不动杆菌分离株同时携带blaNDM和blaOXA-48。

使用基质辅助激光解吸/电离飞行时间(MALDI-TOF)对2019年至2020年期间收集的256株临床菌株进行鉴定。采用纸片扩散法和E-test法进行药敏试验。采用实时聚合酶链反应(RT-PCR)、标准PCR和测序技术研究编码超广谱β-内酰胺酶、碳青霉烯酶和黏菌素耐药基因。

我们首次报告了吉布提存在MDR-GNB临床分离株以及碳青霉烯类耐药分离株的出现。除了进行药敏试验外,我们建议进行表型和分子筛查,以追踪碳青霉烯酶基因在临床GNB分离株中的传播。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/126d/10376901/f7cf358816a4/antibiotics-12-01132-g001.jpg

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