Zhong Zheng, Ryu Kanghyun, Mao Jonathan, Sun Kaibao, Dan Guangyu, Vasanawala Shreyas S, Zhou Xiaohong Joe
Departments of Radiology, Stanford University, Stanford, CA 94305, USA.
Center for Magnetic Resonance Research, Chicago, IL 60612, USA.
Bioengineering (Basel). 2023 Jul 21;10(7):864. doi: 10.3390/bioengineering10070864.
To develop a novel convolutional recurrent neural network (CRNN-DWI) and apply it to reconstruct a highly undersampled (up to six-fold) multi-b-value, multi-direction diffusion-weighted imaging (DWI) dataset.
A deep neural network that combines a convolutional neural network (CNN) and recurrent neural network (RNN) was first developed by using a set of diffusion images as input. The network was then used to reconstruct a DWI dataset consisting of 14 b-values, each with three diffusion directions. For comparison, the dataset was also reconstructed with zero-padding and 3D-CNN. The experiments were performed with undersampling rates (R) of 4 and 6. Standard image quality metrics (SSIM and PSNR) were employed to provide quantitative assessments of the reconstructed image quality. Additionally, an advanced non-Gaussian diffusion model was employed to fit the reconstructed images from the different approaches, thereby generating a set of diffusion parameter maps. These diffusion parameter maps from the different approaches were then compared using SSIM as a metric.
Both the reconstructed diffusion images and diffusion parameter maps from CRNN-DWI were better than those from zero-padding or 3D-CNN. Specifically, the average SSIM and PSNR of CRNN-DWI were 0.750 ± 0.016 and 28.32 ± 0.69 (R = 4), and 0.675 ± 0.023 and 24.16 ± 0.77 (R = 6), respectively, both of which were substantially higher than those of zero-padding or 3D-CNN reconstructions. The diffusion parameter maps from CRNN-DWI also yielded higher SSIM values for R = 4 (>0.8) and for R = 6 (>0.7) than the other two approaches (for R = 4, <0.7, and for R = 6, <0.65).
CRNN-DWI is a viable approach for reconstructing highly undersampled DWI data, providing opportunities to reduce the data acquisition burden.
开发一种新型卷积循环神经网络(CRNN-DWI),并将其应用于重建高度欠采样(高达六倍)的多b值、多方向扩散加权成像(DWI)数据集。
首先通过使用一组扩散图像作为输入来开发一种结合卷积神经网络(CNN)和循环神经网络(RNN)的深度神经网络。然后使用该网络重建由14个b值组成的DWI数据集,每个b值具有三个扩散方向。为了进行比较,还使用零填充和3D-CNN对该数据集进行了重建。实验以4和6的欠采样率(R)进行。采用标准图像质量指标(SSIM和PSNR)对重建图像质量进行定量评估。此外,采用一种先进的非高斯扩散模型对来自不同方法的重建图像进行拟合,从而生成一组扩散参数图。然后使用SSIM作为指标对来自不同方法的这些扩散参数图进行比较。
CRNN-DWI重建的扩散图像和扩散参数图均优于零填充或3D-CNN重建的结果。具体而言,CRNN-DWI的平均SSIM和PSNR在R = 4时分别为0.750±0.016和28.32±0.69,在R = 6时分别为0.675±0.023和24.16±0.77,两者均显著高于零填充或3D-CNN重建的结果。对于R = 4(>0.8)和R = 6(>0.7),CRNN-DWI的扩散参数图的SSIM值也高于其他两种方法(对于R = 4,<0.7;对于R = 6,<0.65)。
CRNN-DWI是重建高度欠采样DWI数据的一种可行方法,为减轻数据采集负担提供了机会。