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结直肠癌中与二硫化物诱导的细胞程序性坏死相关亚型的鉴定、肿瘤微环境浸润特征分析及预后模型的构建

Identification of disulfidptosis-related subtypes, characterization of tumor microenvironment infiltration, and development of a prognosis model in colorectal cancer.

作者信息

Li Ying, Tang Mengyao, Dang Wei, Zhu Shu, Wang Yunpeng

机构信息

College of Traditional Chinese Medicine, Shandong University of Traditional Chinese Medicine, Jinan, Shandong, China.

Shandong University of Traditional Chinese Medicine, Jinan, Shandong, China.

出版信息

J Cancer Res Clin Oncol. 2023 Nov;149(15):13995-14014. doi: 10.1007/s00432-023-05211-1. Epub 2023 Aug 6.

Abstract

BACKGROUND

Colorectal cancer is the second leading cause of cancer-related deaths, which imposes a significant societal burden. Regular screening and emerging molecular tumor markers have important implications for detecting the progression and development of colorectal cancer. Disulfidptosis is a newly defined type of programmed cell death triggered by abnormal accumulation of disulfide compounds in cells that stimulate disulfide stress. Currently, there is no relevant discussion on this mechanism and colorectal cancer.

METHODS

We classified the disulfidptosis-related subtypes of colorectal cancer using bioinformatics methods. Through secondary clustering of differentially expressed genes between subtypes, we identified characteristic genes of the disulfidptosis subtype, constructed a prognostic model, and searched for potential biomarkers through clinical validation.

RESULTS

Using disulfidptosis-related genes collected from the literature, we classified colorectal cancer patients from public databases into three subtypes. The differentially expressed genes between subtypes were clustered into three gene subtypes, and eight characteristic genes were screened to construct a prognostic model.

CONCLUSION

The disulfidptosis mechanism has important value in the classification of colorectal cancer patients, and characteristic genes selected based on this mechanism can serve as a new potential biological marker for colorectal cancer.

摘要

背景

结直肠癌是癌症相关死亡的第二大主要原因,给社会带来了沉重负担。定期筛查和新兴的分子肿瘤标志物对检测结直肠癌的进展和发展具有重要意义。二硫键诱导的细胞焦亡是一种新定义的程序性细胞死亡类型,由细胞内二硫键化合物异常积累引发,从而刺激二硫键应激。目前,关于这种机制与结直肠癌尚无相关讨论。

方法

我们使用生物信息学方法对结直肠癌的二硫键诱导的细胞焦亡相关亚型进行分类。通过对亚型间差异表达基因进行二次聚类,我们鉴定了二硫键诱导的细胞焦亡亚型的特征基因,构建了预后模型,并通过临床验证寻找潜在的生物标志物。

结果

利用从文献中收集的与二硫键诱导的细胞焦亡相关的基因,我们将来自公共数据库的结直肠癌患者分为三个亚型。将亚型间的差异表达基因聚类为三个基因亚型,并筛选出八个特征基因来构建预后模型。

结论

二硫键诱导的细胞焦亡机制在结直肠癌患者分类中具有重要价值,基于该机制选择的特征基因可作为结直肠癌一种新的潜在生物标志物。

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