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硅藻黏附追踪蛋白通过水平基因转移从细菌中获得,作为海洋生物膜形成的引物。

Diatom adhesive trail proteins acquired by horizontal gene transfer from bacteria serve as primers for marine biofilm formation.

机构信息

B CUBE Center for Molecular Bioengineering, Technische Universität Dresden, Dresden, 01307, Germany.

Department of Biology, Protistology and Aquatic Ecology, Ghent University, Ghent, 9000, Belgium.

出版信息

New Phytol. 2023 Oct;240(2):770-783. doi: 10.1111/nph.19145. Epub 2023 Aug 7.

DOI:10.1111/nph.19145
PMID:37548082
Abstract

Biofilm-forming benthic diatoms are key primary producers in coastal habitats, where they frequently dominate sunlit intertidal substrata. The development of gliding motility in raphid diatoms was a key molecular adaptation that contributed to their evolutionary success. However, the structure-function correlation between diatom adhesives utilized for gliding and their relationship to the extracellular matrix that constitutes the diatom biofilm is unknown. Here, we have used proteomics, immunolocalization, comparative genomics, phylogenetics and structural homology analysis to investigate the evolutionary history and function of diatom adhesive proteins. Our study identified eight proteins from the adhesive trails of Craspedostauros australis, of which four form a new protein family called Trailins that contain an enigmatic Choice-of-Anchor A (CAA) domain, which was acquired through horizontal gene transfer from bacteria. Notably, the CAA-domain shares a striking structural similarity with one of the most widespread domains found in ice-binding proteins (IPR021884). Our work offers new insights into the molecular basis for diatom biofilm formation, shedding light on the function and evolution of diatom adhesive proteins. This discovery suggests that there is a transition in the composition of biomolecules required for initial surface colonization and those utilized for 3D biofilm matrix formation.

摘要

形成生物膜的底栖硅藻是沿海栖息地的主要初级生产者,它们经常在阳光充足的潮间带基质中占主导地位。滑行运动能力的发展是raphid 硅藻进化成功的关键分子适应。然而,用于滑行的硅藻粘合剂的结构-功能相关性及其与构成硅藻生物膜的细胞外基质的关系尚不清楚。在这里,我们使用蛋白质组学、免疫定位、比较基因组学、系统发育学和结构同源性分析来研究硅藻粘合剂蛋白的进化历史和功能。我们的研究从粘性轨迹中鉴定出 8 种来自澳大利亚 Crasipeostauros 的蛋白,其中 4 种形成了一个新的蛋白家族,称为 Trailins,其中包含一个神秘的锚定选择 A(CAA)结构域,该结构域通过水平基因转移从细菌中获得。值得注意的是,CAA 结构域与冰结合蛋白(IPR021884)中最广泛的结构域之一具有惊人的结构相似性。我们的工作为硅藻生物膜形成的分子基础提供了新的见解,阐明了硅藻粘合剂蛋白的功能和进化。这一发现表明,在初始表面定植和用于 3D 生物膜基质形成所需的生物分子组成方面存在转变。

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