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根据结直肠癌淋巴结转移情况通过发现特定生物标志物预测预后。

Predicting prognosis through the discovery of specific biomarkers according to colorectal cancer lymph node metastasis.

作者信息

Park Sung Won, Kang Junho, Kim Hyung-Sik, Yoon Sik, Kim Byoung Soo, Lim Chaeseong, Lee Dongjun, Kim Yun Hak

机构信息

Department of Convergence Medical Science, School of Medicine, Pusan National University Yangsan-si, Gyeongsangnam-do 50612, Republic of Korea.

Medical Research Institute, Pusan National University Busan 46241, Republic of Korea.

出版信息

Am J Cancer Res. 2023 Jul 15;13(7):3221-3233. eCollection 2023.

Abstract

Colorectal cancer (CRC) is a prevalent cancer worldwide, ranking as the third most common cancer and the second leading cause of cancer-related deaths. The presence or absence of lymph node metastases is one of the representative markers for predicting CRC prognosis, but often yields heterogeneous results. In this study, we conducted an integrative molecular analysis of CRC using publicly available data from The Cancer Genome Atlas database and NCBI's Gene Expression Omnibus. Through our analysis, we identified 372 upregulated genes that were differentially expressed in CRC patients. Additionally, Kyoto Encyclopedia of Genes and Genomes analysis revealed five significant pathways, including Hippo, FC-gamma, and forkhead box O signaling pathways, which are known to be associated with cancer. Survival analysis of 28 genes involved in these pathways led to the identification of 13 genes with prognostic significance (P < 0.05). To validate our findings, logistic regression models were generated and tested in multiple cohorts, demonstrating significant accuracy. Moreover, we identified six genes ( and ) whose combination predicted the best prognosis based on survival analysis. This predictive model holds promise as a potential biomarker for prognosis, survival, and treatment efficacy. In conclusion, our study provides valuable insights into the molecular characteristics of CRC and identifies prognostic biomarkers. The combination of differentially expressed genes and their involvement in cancer-related pathways enhances our understanding of CRC pathogenesis and opens avenues for personalized treatment approaches and improved patient outcomes.

摘要

结直肠癌(CRC)是全球一种常见的癌症,是第三大常见癌症以及癌症相关死亡的第二大主要原因。有无淋巴结转移是预测CRC预后的代表性标志物之一,但结果往往存在异质性。在本研究中,我们使用来自癌症基因组图谱数据库和NCBI的基因表达综合数据库的公开可用数据,对CRC进行了综合分子分析。通过我们的分析,我们鉴定出372个在CRC患者中差异表达的上调基因。此外,京都基因与基因组百科全书分析揭示了五条重要通路,包括河马通路、Fc-γ通路和叉头框O信号通路,这些通路已知与癌症有关。对这些通路中涉及的28个基因进行生存分析,从而鉴定出13个具有预后意义的基因(P < 0.05)。为了验证我们的发现,我们生成了逻辑回归模型并在多个队列中进行了测试,显示出显著的准确性。此外,基于生存分析,我们鉴定出六个基因(和),它们的组合预测了最佳预后。这种预测模型有望成为一种潜在的预后、生存和治疗疗效生物标志物。总之,我们的研究为CRC的分子特征提供了有价值的见解,并鉴定出预后生物标志物。差异表达基因及其参与癌症相关通路的情况,增强了我们对CRC发病机制的理解,并为个性化治疗方法和改善患者预后开辟了道路。

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Pathological Features and Prognostication in Colorectal Cancer.结直肠癌的病理特征与预后
Curr Oncol. 2021 Dec 13;28(6):5356-5383. doi: 10.3390/curroncol28060447.
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Nat Rev Drug Discov. 2021 Oct;20(10):798. doi: 10.1038/s41573-021-00300-7.
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Nat Rev Immunol. 2020 Oct;20(10):633-643. doi: 10.1038/s41577-020-00410-0. Epub 2020 Aug 11.
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Colorectal cancer.结直肠癌。
Lancet. 2019 Oct 19;394(10207):1467-1480. doi: 10.1016/S0140-6736(19)32319-0.

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