Department of Gastrointestinal Surgery, Renmin Hospital of Wuhan University, Wuhan, China.
Front Immunol. 2021 Jul 16;12:717505. doi: 10.3389/fimmu.2021.717505. eCollection 2021.
As a heterogeneous disease, colorectal cancer (CRC) presents a great challenge to individualized treatment due to its lymph node metastasis (LNM). Existing studies have shown that immune and stromal components in extracellular matrix (ECM) act as important part in tumorigenicity and progression, while their roles in LNM have not been fully elucidated. Here, crucial ECM-related genes responsible for LNM in CRC were selected by multi-omics analysis.
Firstly, we characterized the immune infiltration landscape of CRC samples from The Cancer Genome Atlas (TCGA) and the Gene Expression Omnibus (GEO) databases by using ssGSEA algorithm. The CRC patients were divided into several immune subgroups by hierarchical clustering analyses. Then, differential genes were identified among immune subgroups and CRC normal tissues in TCGA and GEO GSE39582 cohorts, respectively. Next, weighted correlation network analysis (WGCNA) was employed to construct a co-expression network to find LNM-related modules and hub genes. Subsequently, we evaluated the clinical value of hub gene in prognostic prediction and chemotherapy/immunotherapy. Besides, the protein level of key gene was verified in an external cohort from our center. Finally, we explored the underlying mechanism of FSTL3-mediated LNM by Gene function annotation and correlation analysis.
Two immune subgroups, namely Immunity_High and Immunity_Low, were defined among the two CRC cohorts using ssGSEA algorithm, respectively. Based on the two immune subgroups, 2,635 overlapping differentially expressed genes were obtained from two cohorts, which were sequentially subjected to WGCNA and univariate Cox regression analysis. Ultimately, was selected as the key gene. Here, we first confirmed that overexpression of correlated with LNM and worse prognosis in CRC and was verified at the protein level in the external validation cohort. Moreover, FSTL3 expression showed strongly positive correlation with immune and stromal components in ECM. We furthermore found that FSTL3 may accelerate LNM through the formation of inhibitory immune microenvironment promoting macrophage and fibroblast polarization and T cell exhaustion. Interestingly, high FSTL3 expression is linked to chemoresistance, but immunotherapy-sensitive.
FSTL3 is identified as a biomarker for ECM remodeling and worse clinical outcomes for the first time in CRC and is also a potential immunotherapeutic target to block LNM for CRC.
作为一种异质性疾病,结直肠癌(CRC)由于其淋巴结转移(LNM),给个体化治疗带来了巨大挑战。现有研究表明,细胞外基质(ECM)中的免疫和基质成分在肿瘤发生和进展中起着重要作用,但它们在 LNM 中的作用尚未完全阐明。在这里,通过多组学分析选择了与 CRC 中 LNM 相关的关键 ECM 相关基因。
首先,我们使用 ssGSEA 算法对来自癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)的 CRC 样本的免疫浸润图谱进行了特征描述。通过层次聚类分析将 CRC 患者分为几个免疫亚群。然后,在 TCGA 和 GEO GSE39582 队列中分别鉴定免疫亚群和 CRC 正常组织之间的差异基因。接下来,使用加权相关网络分析(WGCNA)构建共表达网络,以寻找与 LNM 相关的模块和枢纽基因。随后,我们评估了枢纽基因在预后预测和化疗/免疫治疗中的临床价值。此外,在我们中心的一个外部队列中验证了关键基因的蛋白水平。最后,通过基因功能注释和相关性分析探索了 FSTL3 介导的 LNM 的潜在机制。
使用 ssGSEA 算法分别在两个 CRC 队列中定义了两个免疫亚群,即 Immunity_High 和 Immunity_Low。基于这两个免疫亚群,从两个队列中获得了 2635 个重叠的差异表达基因,这些基因随后进行了 WGCNA 和单变量 Cox 回归分析。最终, 被选为关键基因。在这里,我们首先证实,CRC 中 的过表达与 LNM 和更差的预后相关,并在外部验证队列中得到了蛋白水平的验证。此外,FSTL3 表达与 ECM 中的免疫和基质成分呈强烈正相关。我们还发现,FSTL3 可能通过形成抑制性免疫微环境、促进巨噬细胞和成纤维细胞极化以及 T 细胞耗竭来加速 LNM。有趣的是,高 FSTL3 表达与化疗耐药性相关,但对免疫治疗敏感。
FSTL3 首次被确定为 CRC 中 ECM 重塑和临床结局恶化的生物标志物,也是阻止 CRC 中 LNM 的潜在免疫治疗靶点。