• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

体外转录自组装 DNA 纳米颗粒。

In vitro transcription of self-assembling DNA nanoparticles.

机构信息

Department of Biochemistry and Molecular Biology, Iowa State University, Ames, IA, 50011, USA.

Department of Genetics, Development, and Cell Biology, Iowa State University, Ames, IA, 50011, USA.

出版信息

Sci Rep. 2023 Aug 10;13(1):12961. doi: 10.1038/s41598-023-39777-0.

DOI:10.1038/s41598-023-39777-0
PMID:37563161
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10415316/
Abstract

Nucleic acid nanoparticles are playing an increasingly important role in biomolecular diagnostics and therapeutics as well as a variety of other areas. The unique attributes of self-assembling DNA nanoparticles provide a potentially valuable addition or alternative to the lipid-based nanoparticles that are currently used to ferry nucleic acids in living systems. To explore this possibility, we have assessed the ability of self-assembling DNA nanoparticles to be constructed from complete gene cassettes that are capable of gene expression in vitro. In the current report, we describe the somewhat counter-intuitive result that despite extensive crossovers (the stereochemical analogs of Holliday junctions) and variations in architecture, these DNA nanoparticles are amenable to gene expression as evidenced by T7 RNA polymerase-driven transcription of a reporter gene in vitro. These findings, coupled with the vastly malleable architecture and chemistry of self-assembling DNA nanoparticles, warrant further investigation of their utility in biomedical genetics.

摘要

核酸纳米颗粒在生物分子诊断和治疗以及其他各种领域中发挥着越来越重要的作用。自组装 DNA 纳米颗粒的独特属性为脂质纳米颗粒提供了一种潜在的有价值的补充或替代,脂质纳米颗粒目前用于在活系统中输送核酸。为了探索这种可能性,我们已经评估了自组装 DNA 纳米颗粒从能够在体外表达基因的完整基因盒构建的能力。在当前的报告中,我们描述了一个有些违反直觉的结果,尽管存在广泛的交叉(霍利迪结的立体化学类似物)和结构变化,但这些 DNA 纳米颗粒可进行基因表达,这表现在 T7 RNA 聚合酶体外驱动报告基因转录。这些发现,加上自组装 DNA 纳米颗粒的结构和化学的高度可塑,证明了它们在生物医学遗传学中的应用具有进一步研究的价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/f3d59dccdf2b/41598_2023_39777_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/afa263e6cedd/41598_2023_39777_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/0f30266341eb/41598_2023_39777_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/e9da62b14eff/41598_2023_39777_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/7336cf1a2e4c/41598_2023_39777_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/b9059acd4403/41598_2023_39777_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/f3d59dccdf2b/41598_2023_39777_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/afa263e6cedd/41598_2023_39777_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/0f30266341eb/41598_2023_39777_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/e9da62b14eff/41598_2023_39777_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/7336cf1a2e4c/41598_2023_39777_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/b9059acd4403/41598_2023_39777_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f224/10415316/f3d59dccdf2b/41598_2023_39777_Fig6_HTML.jpg

相似文献

1
In vitro transcription of self-assembling DNA nanoparticles.体外转录自组装 DNA 纳米颗粒。
Sci Rep. 2023 Aug 10;13(1):12961. doi: 10.1038/s41598-023-39777-0.
2
Lipid nanoparticles for RNA delivery: Self-assembling vs driven-assembling strategies.用于 RNA 递送的脂质纳米颗粒:自组装与驱动组装策略。
Adv Drug Deliv Rev. 2024 May;208:115291. doi: 10.1016/j.addr.2024.115291. Epub 2024 Mar 19.
3
When transcription goes on Holliday: Double Holliday junctions block RNA polymerase II transcription in vitro.当转录进行到 Holliday 时:体外的双链 Holliday 连接阻止 RNA 聚合酶 II 的转录。
Biochim Biophys Acta Gene Regul Mech. 2017 Feb;1860(2):282-288. doi: 10.1016/j.bbagrm.2016.12.002. Epub 2016 Dec 5.
4
Type III intermediate filament proteins interact with four-way junction DNA and facilitate its cleavage by the junction-resolving enzyme T7 endonuclease I.III型中间丝蛋白与四向连接DNA相互作用,并促进连接解离酶T7核酸内切酶I对其进行切割。
DNA Cell Biol. 2003 Apr;22(4):261-91. doi: 10.1089/104454903321908656.
5
Mechanical properties of DNA origami nanoassemblies are determined by Holliday junction mechanophores.DNA折纸纳米组件的机械性能由霍利迪连接体机械力传感器决定。
Nucleic Acids Res. 2016 Aug 19;44(14):6574-82. doi: 10.1093/nar/gkw610. Epub 2016 Jul 7.
6
Effect of DNA supercoiling on the geometry of holliday junctions.DNA超螺旋对霍利迪连接体几何结构的影响。
Biochemistry. 2006 Oct 31;45(43):12998-3006. doi: 10.1021/bi061002k.
7
Development and characterization of self-assembling nanoparticles using a bio-inspired amphipathic peptide for gene delivery.利用一种受生物启发的两亲性肽开发和表征用于基因传递的自组装纳米颗粒。
J Control Release. 2014 Sep 10;189:141-9. doi: 10.1016/j.jconrel.2014.06.048. Epub 2014 Jul 1.
8
Self-assembling micelle-like nanoparticles with detachable envelopes for enhanced delivery of nucleic acid therapeutics.具有可分离包膜的自组装胶束状纳米颗粒,用于增强核酸治疗药物的递送。
Mol Pharm. 2014 Mar 3;11(3):904-12. doi: 10.1021/mp400579h. Epub 2014 Jan 29.
9
Synthetic junctions as tools to identify and characterize Holliday junction resolvases.合成连接体作为鉴定和表征霍利迪连接体解离酶的工具。
Methods Enzymol. 2006;408:485-501. doi: 10.1016/S0076-6879(06)08030-X.
10
Single-molecule studies of DNA and RNA four-way junctions.DNA和RNA四向连接体的单分子研究
Biochem Soc Trans. 2004 Feb;32(Pt 1):41-5. doi: 10.1042/bst0320041.

引用本文的文献

1
Design and Characterization of a Gene-Encoding DNA Nanoparticle in a Cell-Free Transcription-Translation System.无细胞转录-翻译系统中基因编码DNA纳米颗粒的设计与表征
ACS Appl Nano Mater. 2024 Jun 14;7(11):12891-12902. doi: 10.1021/acsanm.4c01456. Epub 2024 May 30.
2
Plugging synthetic DNA nanoparticles into the central dogma of life.将合成DNA纳米颗粒融入生命的中心法则。
Chem Commun (Camb). 2024 Dec 19;61(2):220-231. doi: 10.1039/d4cc04648j.
3
DNA origami drives gene expression in a human cell culture system.DNA 折纸术在人类细胞培养系统中驱动基因表达。

本文引用的文献

1
A single strand: A simplified approach to DNA origami.单链:一种简化的DNA折纸方法。
Front Chem. 2023 Feb 20;11:1126177. doi: 10.3389/fchem.2023.1126177. eCollection 2023.
2
Gene-encoding DNA origami for mammalian cell expression.基因编码的用于哺乳动物细胞表达的 DNA 折纸术。
Nat Commun. 2023 Feb 23;14(1):1017. doi: 10.1038/s41467-023-36601-1.
3
Assessing the cost-effectiveness of DNA origami nanostructures for targeted delivery of anti-cancer drugs to tumours.评估 DNA 折纸纳米结构用于将抗癌药物靶向递送至肿瘤的成本效益。
Sci Rep. 2024 Nov 9;14(1):27364. doi: 10.1038/s41598-024-78399-y.
4
Strategies to Reduce Promoter-Independent Transcription of DNA Nanostructures and Strand Displacement Complexes.降低 DNA 纳米结构和链置换复合物启动子非依赖性转录的策略。
ACS Synth Biol. 2024 Jul 19;13(7):1964-1977. doi: 10.1021/acssynbio.3c00726. Epub 2024 Jun 17.
Biomed Phys Eng Express. 2020 Nov 24;6(6). doi: 10.1088/2057-1976/abbe73.
4
CRISPR-Cas9-mediated nuclear transport and genomic integration of nanostructured genes in human primary cells.CRISPR-Cas9 介导的纳米结构基因在人原代细胞中的核转运和基因组整合。
Nucleic Acids Res. 2022 Feb 22;50(3):1256-1268. doi: 10.1093/nar/gkac049.
5
delivery of CRISPR-Cas9 therapeutics: Progress and challenges.CRISPR-Cas9疗法的递送:进展与挑战。
Acta Pharm Sin B. 2021 Aug;11(8):2150-2171. doi: 10.1016/j.apsb.2021.05.020. Epub 2021 May 26.
6
Recombinant protein vaccines, a proven approach against coronavirus pandemics.重组蛋白疫苗,对抗冠状病毒大流行的成熟手段。
Adv Drug Deliv Rev. 2021 Mar;170:71-82. doi: 10.1016/j.addr.2021.01.001. Epub 2021 Jan 7.
7
Synthesis of DNA Origami Scaffolds: Current and Emerging Strategies.DNA 折纸支架的合成:当前和新兴策略。
Molecules. 2020 Jul 26;25(15):3386. doi: 10.3390/molecules25153386.
8
Opportunities and challenges for the clinical translation of structured DNA assemblies as gene therapeutic delivery and vaccine vectors.作为基因治疗传递和疫苗载体的结构 DNA 组装体的临床转化的机遇与挑战。
Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2021 Jan;13(1):e1657. doi: 10.1002/wnan.1657. Epub 2020 Jul 15.
9
DNA Origami Meets Polymers: A Powerful Tool for the Design of Defined Nanostructures.DNA 折纸术与聚合物相遇:设计定义明确的纳米结构的强大工具。
Angew Chem Int Ed Engl. 2021 Mar 15;60(12):6218-6229. doi: 10.1002/anie.202005907. Epub 2020 Oct 28.
10
Systemic nanoparticle delivery of CRISPR-Cas9 ribonucleoproteins for effective tissue specific genome editing.系统递送 CRISPR-Cas9 核糖核蛋白纳米颗粒用于有效的组织特异性基因组编辑。
Nat Commun. 2020 Jun 26;11(1):3232. doi: 10.1038/s41467-020-17029-3.