Zhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University, Hangzhou, China.
Shaoxing Institute, Zhejiang University, Shaoxing, China.
Nat Chem Biol. 2024 Jan;20(1):42-51. doi: 10.1038/s41589-023-01400-8. Epub 2023 Aug 10.
Protein lipidation, which regulates numerous biological pathways and plays crucial roles in the pharmaceutical industry, is not encoded by the genetic code but synthesized post-translationally. In the present study, we report a computational approach for designing lipidation mimics that fully recapitulate the biochemical properties of natural lipidation in membrane association and albumin binding. Furthermore, we establish an engineered system for co-translational incorporation of these lipidation mimics into virtually any desired position of proteins in Escherichia coli and mammalian cells. We demonstrate the utility of these length-tunable lipidation mimics in diverse applications, including improving the half-life and activity of therapeutic proteins in living mice, anchoring functional proteins to membrane by substituting natural lipidation, functionally characterizing proteins carrying different lengths of lipidation and determining the plasma membrane-binding capacity of a given compound. Our strategy enables gain-of-function studies of lipidation in hundreds of proteins and facilitates the creation of superior therapeutic candidates.
蛋白质脂质化修饰,调控着众多生物途径,在制药行业中起着至关重要的作用,但其并不由遗传密码编码,而是在翻译后合成。在本研究中,我们报告了一种设计脂质化模拟物的计算方法,这些模拟物能够完全再现天然脂质化在膜结合和白蛋白结合方面的生化特性。此外,我们建立了一个工程系统,可将这些脂质化模拟物共翻译整合到大肠杆菌和哺乳动物细胞中几乎任何所需的蛋白质位置。我们证明了这些长度可调的脂质化模拟物在多种应用中的实用性,包括提高治疗性蛋白在活体小鼠中的半衰期和活性、通过替代天然脂质化将功能性蛋白锚定在膜上、对带有不同长度脂质化的蛋白进行功能特征分析以及确定给定化合物与质膜的结合能力。我们的策略能够对数百种蛋白质的脂质化进行功能获得研究,并有助于创造更优秀的治疗候选物。