Wardecki Dawid, Dołowy Małgorzata, Bober-Majnusz Katarzyna
Faculty of Pharmaceutical Sciences in Sosnowiec, Doctoral School, Medical University of Silesia in Katowice, 41-200 Sosnowiec, Poland.
Department of Analytical Chemistry, Faculty of Pharmaceutical Sciences in Sosnowiec, Medical University of Silesia in Katowice, 41-200 Sosnowiec, Poland.
Molecules. 2023 Aug 2;28(15):5822. doi: 10.3390/molecules28155822.
Due to the observed increase in the importance of computational methods in determining selected physicochemical parameters of biologically active compounds that are key to understanding their ADME/T profile, such as lipophilicity, there is a great need to work on accurate and precise in silico models based on some structural descriptors, such as topological indices for predicting lipophilicity of certain anti-androgenic and hypouricemic agents and their derivatives, for which the experimental lipophilicity parameter is not accurately described in the available literature, e.g., febuxostat, oxypurinol, ailanthone, abiraterone and teriflunomide. Therefore, the following topological indices were accurately calculated in this paper: Gutman (M, M), Randić (χ, χ, χ, χ), Wiener (W), Rouvray-Crafford (R) and Pyka (A, B, B) for the selected anti-androgenic drugs (abiraterone, bicalutamide, flutamide, nilutamide, leflunomide, teriflunomide, ailanthone) and some hypouricemic compounds (allopurinol, oxypurinol, febuxostat). Linear regression analysis was used to create simple linear correlations between the newly calculated topological indices and some physicochemical parameters, including lipophilicity descriptors of the tested compounds (previously obtained by TLC and theoretical methods). Our studies confirmed the usefulness of the obtained linear regression equations based on topological indices to predict ADME/T important parameters, such as lipophilicity descriptors of tested compounds with anti-androgenic and hypouricemic effects. The proposed calculation method based on topological indices is fast, easy to use and avoids valuable and lengthy laboratory experiments required in the case of experimental ADME/T studies.
由于观察到计算方法在确定生物活性化合物的某些物理化学参数方面的重要性日益增加,这些参数对于理解其ADME/T特性(如亲脂性)至关重要,因此迫切需要基于一些结构描述符构建准确且精确的计算机模拟模型,例如用于预测某些抗雄激素和降尿酸药物及其衍生物亲脂性的拓扑指数,而现有文献中并未准确描述这些药物的实验亲脂性参数,如非布索坦、氧嘌呤醇、樗酮、阿比特龙和特立氟胺。因此,本文准确计算了以下拓扑指数:针对选定的抗雄激素药物(阿比特龙、比卡鲁胺、氟他胺、尼鲁米特、来氟米特、特立氟胺、樗酮)和一些降尿酸化合物(别嘌醇、氧嘌呤醇、非布索坦)的古特曼指数(M,M)、兰迪奇指数(χ,χ,χ,χ)、维纳指数(W)、鲁夫雷 -克拉福德指数(R)和皮卡指数(A,B,B)。使用线性回归分析在新计算的拓扑指数与一些物理化学参数之间建立简单的线性相关性,包括测试化合物的亲脂性描述符(先前通过薄层色谱法和理论方法获得)。我们的研究证实了基于拓扑指数获得的线性回归方程在预测ADME/T重要参数方面的有用性,例如具有抗雄激素和降尿酸作用的测试化合物的亲脂性描述符。所提出的基于拓扑指数的计算方法快速、易于使用,并且避免了实验性ADME/T研究所需的昂贵且冗长的实验室实验。