Medical Genomics Research Center, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
Department of Genetics, Faculty of Advanced Science and Technology, Tehran Medical Sciences, Islamic Azad University, P.O. Box: 193951495, Tehran, Iran.
Sci Rep. 2023 Aug 12;13(1):13113. doi: 10.1038/s41598-023-40288-1.
LncPVT1 and CircPVT1 are isoforms for the PVT1 gene and are associated with cancer progression and carcinogenesis. Our study investigated the expression of LncPVT1 and CircPVT1 in colon adenoma polyps. 40 tissues of colorectal polyps and 40 normal-adjacent tissues (NATs) were taken. The expression of LncPVT1 and CircPVT1 was evaluated through qRael-Time PCR. The relation between expression and features of clinicopathological was explored. The ceRNA network was constructed by LncPVT1 and CircPVT1 and predicted miRNAs and miRNAs targets. Further, hub nodes in this network were determined using the cytoHubba package. Over-expressed LncPVT1 and CircPVT1 were differentiated in polyp and NATs. The expression level of LncPVT1 and CircPVT1 were significantly higher in adenoma polyps than in hyperplastic polyps. The area under the curve of the ROC estimate for the LncPVT1 and CircPVT1 was 0.74 and 0.77, respectively. A positive correlation was observed between the LncPVT1 expression and CircPVT1. Three miRNAs, including hsa-miR-484, hsa-miR-24-3p, hsa-miR-423-5p, and CircPVT1, were detected as ceRNA hub nodes. In this study, expression profiles of LncPVT1 and CircPVT1 were significantly higher in precancerous polyps. In addition, based on our in silico analysis, LncPVT1, CircPVT1/miR-484, miR-24-3p, miR-423-5p/PLAGL2 axis might be involved in colon cancer development. LncPVT1 and CircPVT1 can be prescribed as warning problems as potential prognostic biomarkers in patients with pre-CRC colon polyps.
LncPVT1 和 CircPVT1 是 PVT1 基因的同种型,与癌症进展和癌变有关。我们的研究调查了结肠腺瘤息肉中 LncPVT1 和 CircPVT1 的表达。采集了 40 例结直肠息肉组织和 40 例正常相邻组织(NAT)。通过 qRael-Time PCR 评估 LncPVT1 和 CircPVT1 的表达。探讨表达与临床病理特征的关系。通过 LncPVT1 和 CircPVT1 构建 ceRNA 网络,并预测 miRNA 和 miRNA 靶标。进一步,使用 cytoHubba 包确定网络中的枢纽节点。在息肉和 NAT 中区分出过表达的 LncPVT1 和 CircPVT1。腺瘤性息肉中 LncPVT1 和 CircPVT1 的表达水平明显高于增生性息肉。LncPVT1 和 CircPVT1 的 ROC 估计曲线下面积分别为 0.74 和 0.77。LncPVT1 表达与 CircPVT1 呈正相关。检测到 3 个 miRNA,包括 hsa-miR-484、hsa-miR-24-3p、hsa-miR-423-5p 和 CircPVT1,作为 ceRNA 枢纽节点。在这项研究中,癌前息肉中 LncPVT1 和 CircPVT1 的表达谱明显更高。此外,根据我们的计算机分析,LncPVT1、CircPVT1/miR-484、miR-24-3p、miR-423-5p/PLAGL2 轴可能参与结肠癌的发展。LncPVT1 和 CircPVT1 可以作为潜在的预后生物标志物,用于预测 CRC 前结肠息肉患者的预后。