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沙特阿拉伯凯希兰马和哈姆达尼马的线粒体DNA测序

Mitochondrial DNA sequencing of Kehilan and Hamdani horses from Saudi Arabia.

作者信息

Sheikh Abdullah

机构信息

Camel Research Center, King Faisal University, P.O. Box 400, Al-Ahsa 31982, Saudi Arabia.

出版信息

Saudi J Biol Sci. 2023 Sep;30(9):103741. doi: 10.1016/j.sjbs.2023.103741. Epub 2023 Jul 20.

Abstract

The Arabian horse breed is well known for its purity and played a key role in the genetic improvement of other horses worldwide. The mitochondrial genome plays a vital role in maternal inheritance and it's helpful to evaluate its genetic diversity and conservation. It has higher mutation rates than nuclear DNA in vertebrates and therefore reveals phylogenetic relationships and haplotypes. In this study, the mitochondrial genome mutations in two Saudi horse strains, Kehilan and Hamdani demonstrated various changes in the gene and amino acid levels and included two other Saudi horses (Hadban and Seglawi) from the previous study for phylogenetic comparison. The whole mitochondrial genome sequencing resulted in intra and inter mtDNA variations between the studied horses. Interestingly, the Hamdani horse has nucleotide substitutions similar to those of the Hadban horse, which is reflected in the phylogenetic tree as a significantly close relationship. This type of study provides a better understanding of mitogenome structure and conservation of livestock species genetic data.

摘要

阿拉伯马品种以其纯正血统而闻名,在全球其他马匹的基因改良中发挥了关键作用。线粒体基因组在母系遗传中起着至关重要的作用,有助于评估其遗传多样性和保护情况。在脊椎动物中,它的突变率高于核DNA,因此能揭示系统发育关系和单倍型。在本研究中,对沙特的两个马种系(凯希兰和哈姆达尼)的线粒体基因组突变进行了研究,结果表明在基因和氨基酸水平上出现了各种变化,并且纳入了之前研究中的另外两匹沙特马(哈德班和塞格洛维)用于系统发育比较。整个线粒体基因组测序揭示了所研究马匹之间线粒体DNA的内部和种间变异。有趣的是,哈姆达尼马具有与哈德班马相似的核苷酸替换,这在系统发育树中表现为显著的近亲关系。此类研究有助于更好地理解有丝分裂基因组结构以及家畜物种遗传数据的保护情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2919/10413190/30119852d41a/gr1.jpg

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