School of Nursing, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Department of Cardiology, Hospital of Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China.
Genet Res (Camb). 2023 Aug 4;2023:6670514. doi: 10.1155/2023/6670514. eCollection 2023.
The role of disulfidptosis-related lncRNAs remains unclear in lung adenocarcinoma.
Analysis in R software was conducted using different R packages, which are based on the public data from The Cancer Genome Atlas (TCGA) database. The transwell assay was used to evaluate the invasion and migration abilities of lung cancer cells.
In our study, we identified 1401 lncRNAs significantly correlated with disulfidptosis-related genes (|Cor| > 0.3 and < 0.05). Then, we constructed a prognosis model consisting of 11 disulfidptosis-related lncRNAs, including AL133445.2, AL442125.1, AC091132.2, AC090948.1, AC020765.2, CASC8, AL606834.1, LINC00707, OGFRP1, U91328.1, and GASAL1. This prognosis model has satisfactory prediction performance. Also, the risk score and clinical information were combined to develop a nomogram. Analyses of biological enrichment and immune-related data were used to identify underlying differences between patients at high-risk and low-risk groups. Moreover, we noticed that the immunotherapy nonresponders have higher risk scores. Meanwhile, patients at a high risk responded more strongly to docetaxel, paclitaxel, and vinblastine. Furthermore, further analysis of the model lncRNA OGFRP1 was conducted, including clinical, immune infiltration, biological enrichment analysis, and a transwell assay. We discovered that by inhibiting OGFRP1, the invasion and migration abilities of lung cancer cells could be remarkably hindered.
The results of our study can provide directions for future research in the relevant areas. Moreover, the prognosis signature we identified has the potential for clinical application.
二硫键相关长非编码 RNA 在肺腺癌中的作用尚不清楚。
使用不同的 R 包在 R 软件中进行分析,这些 R 包基于癌症基因组图谱(TCGA)数据库中的公共数据。Transwell 实验用于评估肺癌细胞的侵袭和迁移能力。
在我们的研究中,我们确定了 1401 个与二硫键相关基因显著相关的 lncRNAs(|Cor| > 0.3 且 < 0.05)。然后,我们构建了一个由 11 个二硫键相关 lncRNA 组成的预后模型,包括 AL133445.2、AL442125.1、AC091132.2、AC090948.1、AC020765.2、CASC8、AL606834.1、LINC00707、OGFRP1、U91328.1 和 GASAL1。该预后模型具有令人满意的预测性能。此外,还结合风险评分和临床信息开发了列线图。分析生物富集和免疫相关数据,以确定高危和低危组患者之间的潜在差异。此外,我们注意到免疫治疗无应答者的风险评分更高。同时,高危患者对多西紫杉醇、紫杉醇和长春碱的反应更强烈。此外,还对模型 lncRNA OGFRP1 进行了进一步分析,包括临床、免疫浸润、生物富集分析和 Transwell 实验。我们发现,通过抑制 OGFRP1,肺癌细胞的侵袭和迁移能力可以显著受到抑制。
我们的研究结果可为相关领域的进一步研究提供方向。此外,我们确定的预后特征具有临床应用的潜力。