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新合成及表征的2,2-(5,5-(1,4-亚苯基)双(1H-四唑-5,1-二基))双-N-乙酰胺的计算化学与理论化学

Computational and theoretical chemistry of newly synthesized and characterized 2,2-(5,5-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides.

作者信息

Ejaz Syeda Abida, Farid Aftab, Zargar Seema, Channar Pervaiz Ali, Aziz Mubashir, Wani Tanveer A, Attaullah Hafiz Muhammad, Ujhan Rabail, Tehzeeb Arfa, Saeed Aamer, Ali Hafiz Saqib, Erben Mauricio F

机构信息

Department of Pharmaceutical Chemistry, Faculty of Pharmacy, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan.

Department of Chemistry, Quaid-I-Azam University Islamabad, Islamabad, 45320, Pakistan.

出版信息

BMC Chem. 2023 Aug 14;17(1):97. doi: 10.1186/s13065-023-01011-3.

Abstract

Energetic heterocycles, including pyridines, triazoles, and tetrazoles, exhibit greater density, heats of formation, and oxygen balance compared to their carbocyclic counterparts, making them a promising approach for synthesizing novel bis-tetrazole acetamides. Synthesized compounds A-F, some of which feature a chlorine atom attached to the phenyl ring, serve as valuable synthons for aryl coupling reactions. Analysis via H-NMR and C-NMR spectroscopy, as well as density functional considerations through B3LYP functional correlation with 6-311 +  + G(d) and 6-31G(d) basis set, revealed the observed LUMO/HOMO energies and charge transfer within the molecule. Additionally, the dipole moment, chemical hardness, softness, ionization potential, local reactivity potential via Fukui indices and thermodynamic properties (entropy, enthalpy, and Gibbs free energy) of the molecule were calculated through density functional theory studies. In addition, Molecular Docking studies were conducted to investigate the anti-cancer potential of synthesized heterocyclic compounds against caspase 3, NF-KAPPA-B and P53 protein. Molecular docking analysis demonstrated a potent interaction between 2,2'-(5,5'-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2,4-dinitrophenyl) acetamides (6d) and TP53 and NF-KAPPA-B with binding energies of - 11.8 kJ/mol and - 10.9 kJ/mol for TP53 and NF-KAPPA-B, respectively. Similarly, 2,2'-(5,5'-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2-chlorophenyl) acetamides (6f) exhibited a strong interaction with caspase-3 with binding energy of -10.0 kJ/mol, indicating their potential as therapeutic agents against these proteins. Furthermore, the findings of current study was further strengthen by 100 ns molecular dynamics (MD) simulations. Finally, theoretical studies of oxygen balance and nitrogen percentage suggest that these molecules can be utilized as energetic materials.

摘要

与它们的碳环类似物相比,包括吡啶、三唑和四唑在内的含能杂环具有更高的密度、生成热和氧平衡,这使得它们成为合成新型双四唑乙酰胺的一种有前景的方法。合成的化合物A - F,其中一些在苯环上连接有氯原子,是芳基偶联反应中有价值的合成子。通过H - NMR和C - NMR光谱分析,以及通过B3LYP泛函与6 - 311++G(d)和6 - 31G(d)基组的密度泛函考虑,揭示了分子中观察到的LUMO/HOMO能量和电荷转移。此外,通过密度泛函理论研究计算了分子的偶极矩、化学硬度、软度、电离势、基于福井指数的局部反应活性势以及热力学性质(熵、焓和吉布斯自由能)。此外,进行了分子对接研究,以研究合成的杂环化合物对caspase 3、NF - KAPPA - B和P53蛋白的抗癌潜力。分子对接分析表明,2,2'-(5,5'-(1,4 - 亚苯基)双(1H - 四唑 - 5,1 - 二基))双 - N - (2,4 - 二硝基苯基)乙酰胺(6d)与TP53和NF - KAPPA - B之间存在强相互作用,与TP53和NF - KAPPA - B的结合能分别为 - 11.8 kJ/mol和 - 10.9 kJ/mol。同样,2,2'-(5,5'-(1,4 - 亚苯基)双(1H - 四唑 - 5,1 - 二基))双 - N - (2 - 氯苯基)乙酰胺(6f)与caspase - 3表现出强相互作用,结合能为 - 10.0 kJ/mol,表明它们作为针对这些蛋白的治疗剂的潜力。此外,当前研究的结果通过100 ns分子动力学(MD)模拟得到进一步加强。最后,氧平衡和氮含量的理论研究表明,这些分子可作为含能材料使用。

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