Suppr超能文献

相似文献

1
The AutoDock suite at 30.
Protein Sci. 2021 Jan;30(1):31-43. doi: 10.1002/pro.3934. Epub 2020 Sep 12.
2
Computational protein-ligand docking and virtual drug screening with the AutoDock suite.
Nat Protoc. 2016 May;11(5):905-19. doi: 10.1038/nprot.2016.051. Epub 2016 Apr 14.
3
pso@autodock: a fast flexible molecular docking program based on Swarm intelligence.
Chem Biol Drug Des. 2007 Dec;70(6):475-84. doi: 10.1111/j.1747-0285.2007.00588.x. Epub 2007 Nov 6.
4
Docking with AutoDock4.
Methods Mol Biol. 2019;2053:125-148. doi: 10.1007/978-1-4939-9752-7_9.
5
Covalent docking using autodock: Two-point attractor and flexible side chain methods.
Protein Sci. 2016 Jan;25(1):295-301. doi: 10.1002/pro.2733. Epub 2015 Jul 7.
6
Evaluation of AutoDock and AutoDock Vina on the CASF-2013 Benchmark.
J Chem Inf Model. 2018 Aug 27;58(8):1697-1706. doi: 10.1021/acs.jcim.8b00312. Epub 2018 Jul 25.
7
MDockPeP: A Web Server for Blind Prediction of Protein-Peptide Complex Structures.
Methods Mol Biol. 2020;2165:259-272. doi: 10.1007/978-1-0716-0708-4_15.
8
Docking Flexible Cyclic Peptides with .
J Chem Theory Comput. 2019 Oct 8;15(10):5161-5168. doi: 10.1021/acs.jctc.9b00557. Epub 2019 Sep 17.
9
Protein-small molecule docking with receptor flexibility in iMOLSDOCK.
J Comput Aided Mol Des. 2018 Sep;32(9):889-900. doi: 10.1007/s10822-018-0152-8. Epub 2018 Aug 20.
10
jMetalCpp: optimizing molecular docking problems with a C++ metaheuristic framework.
Bioinformatics. 2014 Feb 1;30(3):437-8. doi: 10.1093/bioinformatics/btt679. Epub 2013 Nov 22.

引用本文的文献

8
The working mechanism of biomarkers related to sumoylation modification in coronary artery disease.
Sci Rep. 2025 May 16;15(1):17055. doi: 10.1038/s41598-025-02099-4.

本文引用的文献

1
Comprehensive Evaluation of Fourteen Docking Programs on Protein-Peptide Complexes.
J Chem Theory Comput. 2020 Jun 9;16(6):3959-3969. doi: 10.1021/acs.jctc.9b01208. Epub 2020 May 6.
2
Charting Hydrogen Bond Anisotropy.
J Chem Theory Comput. 2020 Apr 14;16(4):2846-2856. doi: 10.1021/acs.jctc.9b01248. Epub 2020 Mar 10.
4
D3R Grand Challenge 4: prospective pose prediction of BACE1 ligands with AutoDock-GPU.
J Comput Aided Mol Des. 2019 Dec;33(12):1071-1081. doi: 10.1007/s10822-019-00241-9. Epub 2019 Nov 6.
5
Docking Flexible Cyclic Peptides with .
J Chem Theory Comput. 2019 Oct 8;15(10):5161-5168. doi: 10.1021/acs.jctc.9b00557. Epub 2019 Sep 17.
6
AutoGridFR: Improvements on AutoDock Affinity Maps and Associated Software Tools.
J Comput Chem. 2019 Dec 15;40(32):2882-2886. doi: 10.1002/jcc.26054. Epub 2019 Aug 22.
7
AutoDock CrankPep: combining folding and docking to predict protein-peptide complexes.
Bioinformatics. 2019 Dec 15;35(24):5121-5127. doi: 10.1093/bioinformatics/btz459.
8
Asymmetric δ-Lactam Synthesis with a Monomeric Streptavidin Artificial Metalloenzyme.
J Am Chem Soc. 2019 Mar 27;141(12):4815-4819. doi: 10.1021/jacs.9b01596. Epub 2019 Mar 13.
10
AutoDock Bias: improving binding mode prediction and virtual screening using known protein-ligand interactions.
Bioinformatics. 2019 Oct 1;35(19):3836-3838. doi: 10.1093/bioinformatics/btz152.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验