Department of Chemistry, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Central Laboratory, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
J Biomol Struct Dyn. 2024 Oct;42(16):8660-8672. doi: 10.1080/07391102.2023.2247084. Epub 2023 Aug 16.
Despite the recent advances in drug research, finding a safe, effective, and easy to use chemotherapy for human African trypanosomiasis (HAT) remains a challenging task. Trypanosomatids have developed resistance mechanisms towards melarsoprol (the current drug of choice), and the fact that it is poisonous is problematic. Therefore, a search for alternative therapeutics against the parasite is urgently needed. Natural products offer potential for drug discovery, but little or nothing is known about the target of inhibition or possible mode of inhibition. Therefore, this study aimed to use molecular docking and molecular dynamics simulations to evaluate 30 antitrypanosomal natural products as potential inhibitors of trypanothione reductase, a key protein necessary for the survival of the . The study also assessed the pharmacokinetic properties of the most promising compounds. Of the compounds evaluated, α-bisabolol, letestuianin C, waltherione, and mexicanin E were found to bind at the active site of TR and interact with Met115, Tyr112, and Trp23, which are essential for enzyme functioning. Molecular dynamic simulations revealed the sustained binding of α-bisabolol and letestuianin C throughout the simulation period, potentially obstructing the binding of the substrate (T[S]) and impeding catalysis. The binding of these compounds to TR led to the presence of solvent molecules in the enzyme's active site, and this could potentially lead to protein aggregation. Furthermore, α-bisabolol and letestuianin C exhibited promising safety profiles. Consequently, α-bisabolol and letestuianin C have been shown to be viable candidates for targeting trypanothione reductase in the fight against human African trypanosomiasis.Communicated by Ramaswamy H. Sarma.
尽管近年来在药物研究方面取得了进展,但找到一种安全、有效且易于使用的化疗药物来治疗人体非洲锥虫病(HAT)仍然是一项具有挑战性的任务。锥虫已经对美拉胂醇(目前的首选药物)产生了耐药机制,而且它具有毒性也是一个问题。因此,迫切需要寻找针对寄生虫的替代治疗方法。天然产物为药物发现提供了潜力,但对抑制的靶标或可能的抑制模式知之甚少或一无所知。因此,本研究旨在使用分子对接和分子动力学模拟来评估 30 种抗锥虫天然产物,以评估它们作为潜在的 trypanothione 还原酶抑制剂的可能性,该酶是寄生虫生存所必需的关键蛋白。该研究还评估了最有前途的化合物的药代动力学特性。在所评估的化合物中,α- 倍半萜醇、letestuianin C、waltherione 和 mexicanin E 被发现与 TR 的活性位点结合,并与 Met115、Tyr112 和 Trp23 相互作用,这些氨基酸对酶的功能至关重要。分子动力学模拟揭示了 α- 倍半萜醇和 letestuianin C 在整个模拟过程中持续结合,可能阻止底物(T[S])的结合并阻碍催化。这些化合物与 TR 的结合导致酶活性位点中存在溶剂分子,这可能导致蛋白质聚集。此外,α- 倍半萜醇和 letestuianin C 表现出良好的安全性特征。因此,α- 倍半萜醇和 letestuianin C 已被证明是针对人体非洲锥虫病中 trypanothione 还原酶的可行候选药物。由 Ramaswamy H. Sarma 传达。