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中国嘉道理生物样本库的基因分型及人群特征

Genotyping and population characteristics of the China Kadoorie Biobank.

作者信息

Walters Robin G, Millwood Iona Y, Lin Kuang, Schmidt Valle Dan, McDonnell Pandora, Hacker Alex, Avery Daniel, Edris Ahmed, Fry Hannah, Cai Na, Kretzschmar Warren W, Ansari M Azim, Lyons Paul A, Collins Rory, Donnelly Peter, Hill Michael, Peto Richard, Shen Hongbing, Jin Xin, Nie Chao, Xu Xun, Guo Yu, Yu Canqing, Lv Jun, Clarke Robert J, Li Liming, Chen Zhengming

机构信息

Nuffield Department of Population Health, University of Oxford, Oxford OX3 7LF, UK.

MRC Population Health Research Unit, University of Oxford, Oxford OX3 7LF, UK.

出版信息

Cell Genom. 2023 Jul 20;3(8):100361. doi: 10.1016/j.xgen.2023.100361. eCollection 2023 Aug 9.

Abstract

The China Kadoorie Biobank (CKB) is a population-based prospective cohort of >512,000 adults recruited from 2004 to 2008 from 10 geographically diverse regions across China. Detailed data from questionnaires and physical measurements were collected at baseline, with additional measurements at three resurveys involving ∼5% of surviving participants. Analyses of genome-wide genotyping, for >100,000 participants using custom-designed Axiom arrays, reveal extensive relatedness, recent consanguinity, and signatures reflecting large-scale population movements from recent Chinese history. Systematic genome-wide association studies of incident disease, captured through electronic linkage to death and disease registries and to the national health insurance system, replicate established disease loci and identify 14 novel disease associations. Together with studies of candidate drug targets and disease risk factors and contributions to international genetics consortia, these demonstrate the breadth, depth, and quality of the CKB data. Ongoing high-throughput omics assays of collected biosamples and planned whole-genome sequencing will further enhance the scientific value of this biobank.

摘要

中国嘉道理生物样本库(CKB)是一项基于人群的前瞻性队列研究,于2004年至2008年期间从中国10个地理区域招募了超过51.2万名成年人。在基线时收集了来自问卷调查和体格测量的详细数据,并在三次重新调查中对约5%的存活参与者进行了额外测量。对超过10万名参与者使用定制设计的Axiom阵列进行全基因组基因分型分析,揭示了广泛的亲缘关系、近期的近亲结婚现象以及反映中国近代历史上大规模人口迁移的特征。通过与死亡和疾病登记处以及国家医疗保险系统的电子链接捕获的新发疾病的全基因组关联研究,重复了已确定的疾病位点,并确定了14种新的疾病关联。连同对候选药物靶点和疾病风险因素的研究以及对国际遗传学联盟的贡献,这些都证明了CKB数据的广度、深度和质量。对收集的生物样本进行的正在进行的高通量组学分析以及计划中的全基因组测序将进一步提高这个生物样本库的科学价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c562/10435379/7d107e5f7345/fx1.jpg

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