Facultad de Ciencias Químicas, Universidad de Colima, Colima 28400, Mexico.
Consejo Nacional de Humanidades, Ciencia y Tecnología (CONAHCYT), Mexico City 03940, Mexico.
Toxins (Basel). 2023 Aug 9;15(8):498. doi: 10.3390/toxins15080498.
is a recently discovered species of "striped scorpion" found in Mexico. Certain species of are known to be toxic to mammals, leading to numerous cases of human intoxications in the country. Venom components are thought to possess therapeutic potential and/or biotechnological applications. Hence, obtaining and analyzing the secretory gland transcriptome and venom proteome of is relevant, and that is what is described in this communication. Since this is a newly described species, first, its LD to mice was determined and estimated to be 659 ng/g mouse weight. Using RNA extracted from this species and preparing their corresponding cDNA fragments, a transcriptome analysis was obtained on a Genome Analyzer (Illumina) using the 76-base pair-end sequencing protocol. Via high-throughput sequencing, 19,158,736 reads were obtained and ensembled in 835,204 sequences. Of them, 28,399 transcripts were annotated with Pfam. A total of 244 complete transcripts were identified in the transcriptome of . Of these, 109 sequences showed identity to toxins that act on ion channels, 47 enzymes, 17 protease inhibitors (PINs), 11 defense peptides (HDPs), and 60 in other components. In addition, a sample of the soluble venom obtained from this scorpion was analyzed using an Orbitrap Velos apparatus, which allowed for identification by liquid chromatography followed by mass spectrometry (LC-MS/MS) of 70 peptides and proteins: 23 toxins, 27 enzymes, 6 PINs, 3 HDPs, and 11 other components. Until now, this work has the highest number of scorpion venom components identified through omics technologies. The main novel findings described here were analyzed in comparison with the known data from the literature, and this process permitted some new insights in this field.
是一种最近在墨西哥发现的“条纹蝎子”物种。某些种类的 已知对哺乳动物有毒,导致该国许多人类中毒病例。毒液成分被认为具有治疗潜力和/或生物技术应用。因此,获得和分析 的分泌腺转录组和毒液蛋白质组是相关的,这就是本通讯中所描述的。由于这是一个新描述的物种,首先,它对小鼠的 LD 被确定为 659ng/g 小鼠体重。使用从该物种中提取的 RNA,并制备它们相应的 cDNA 片段,在 Genome Analyzer(Illumina)上使用 76 碱基对末端测序方案进行转录组分析。通过高通量测序,获得了 19158736 条读数,并在 835204 个序列中进行了组装。其中,28399 个转录本被 Pfam 注释。在 的转录组中鉴定出 244 个完整的转录本。其中,109 个序列与作用于离子通道的毒素、47 种酶、17 种蛋白酶抑制剂(PINs)、11 种防御肽(HDPs)和 60 种其他成分具有同源性。此外,使用 Orbitrap Velos 仪器分析了从这种蝎子中获得的可溶性毒液样本,通过液相色谱-质谱联用(LC-MS/MS)鉴定出 70 种肽和蛋白质:23 种毒素、27 种酶、6 种 PINs、3 种 HDPs 和 11 种其他成分。到目前为止,这项工作通过组学技术鉴定了蝎子毒液成分的最高数量。这里描述的主要新发现与文献中的已知数据进行了分析,这一过程使该领域有了一些新的见解。