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乳腺癌多基因风险评分在挪威人群中进行风险分层是可行的。

A Breast Cancer Polygenic Risk Score Is Feasible for Risk Stratification in the Norwegian Population.

作者信息

Akdeniz Bayram Cevdet, Mattingsdal Morten, Dominguez-Valentin Mev, Frei Oleksandr, Shadrin Alexey, Puustusmaa Mikk, Saar Regina, Sõber Siim, Møller Pål, Andreassen Ole A, Padrik Peeter, Hovig Eivind

机构信息

Center for Bioinformatics, Department of Informatics, University of Oslo, 0313 Oslo, Norway.

Norwegian Centre for Mental Disorders Research (NORMENT), Division of Mental Health and Addiction, Oslo University Hospital, University of Oslo, 4956 Oslo, Norway.

出版信息

Cancers (Basel). 2023 Aug 16;15(16):4124. doi: 10.3390/cancers15164124.

Abstract

BACKGROUND

Statistical associations of numerous single nucleotide polymorphisms with breast cancer (BC) have been identified in genome-wide association studies (GWAS). Recent evidence suggests that a Polygenic Risk Score (PRS) can be a useful risk stratification instrument for a BC screening strategy, and a PRS test has been developed for clinical use. The performance of the PRS is yet unknown in the Norwegian population.

AIM

To evaluate the performance of PRS models for BC in a Norwegian dataset.

METHODS

We investigated a sample of 1053 BC cases and 7094 controls from different regions of Norway. PRS values were calculated using four PRS models, and their performance was evaluated by the area under the curve (AUC) and the odds ratio (OR). The effect of the PRS on the age of onset of BC was determined by a Cox regression model, and the lifetime absolute risk of developing BC was calculated using the iCare tool.

RESULTS

The best performing PRS model included 3820 SNPs, which yielded an AUC = 0.625 and an OR = 1.567 per one standard deviation increase. The PRS values of the samples correlate with an increased risk of BC, with a hazard ratio of 1.494 per one standard deviation increase (95% confidence interval of 1.406-1.588). The individuals in the highest decile of the PRS have at least twice the risk of developing BC compared to the individuals with a median PRS. The results in this study with Norwegian samples are coherent with the findings in the study conducted using Estonian and UK Biobank samples.

CONCLUSION

The previously validated PRS models have a similar observed accuracy in the Norwegian data as in the UK and Estonian populations. A PRS provides a meaningful association with the age of onset of BC and lifetime risk. Therefore, as suggested in Estonia, a PRS may also be integrated into the screening strategy for BC in Norway.

摘要

背景

在全基因组关联研究(GWAS)中已确定了众多单核苷酸多态性与乳腺癌(BC)的统计学关联。最近的证据表明,多基因风险评分(PRS)可能是乳腺癌筛查策略中一种有用的风险分层工具,并且已经开发出用于临床的PRS检测方法。在挪威人群中,PRS的表现尚不清楚。

目的

评估挪威数据集中乳腺癌PRS模型的表现。

方法

我们调查了来自挪威不同地区的1053例乳腺癌病例和7094例对照样本。使用四种PRS模型计算PRS值,并通过曲线下面积(AUC)和比值比(OR)评估其表现。通过Cox回归模型确定PRS对乳腺癌发病年龄的影响,并使用iCare工具计算患乳腺癌的终生绝对风险。

结果

表现最佳的PRS模型包含3820个单核苷酸多态性,每增加一个标准差,其AUC = 0.625,OR = 1.567。样本的PRS值与乳腺癌风险增加相关,每增加一个标准差,风险比为1.494(95%置信区间为1.406 - 1.588)。与PRS中位数的个体相比,PRS最高十分位数的个体患乳腺癌的风险至少高出两倍。本研究中挪威样本的结果与使用爱沙尼亚和英国生物银行样本进行的研究结果一致。

结论

先前验证的PRS模型在挪威数据中的观察准确性与在英国和爱沙尼亚人群中的相似。PRS与乳腺癌发病年龄和终生风险存在有意义的关联。因此,正如在爱沙尼亚所建议的那样,PRS也可能被纳入挪威的乳腺癌筛查策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2e21/10452897/02767d87613c/cancers-15-04124-g001.jpg

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