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分析硅藻微管中心成分的预测氨基酸序列。

Analysis of Predicted Amino Acid Sequences of Diatom Microtubule Center Components.

机构信息

Limnological Institute, Siberian Branch, Russian Academy of Sciences, Irkutsk 664033, Russia.

Institute for Information Transmission Problems (Kharkevich Institute) of the Russian Academy of Sciences, Moscow 127051, Russia.

出版信息

Int J Mol Sci. 2023 Aug 14;24(16):12781. doi: 10.3390/ijms241612781.

Abstract

Diatoms synthesize species-specific exoskeletons inside cells under the control of the cytoskeleton and microtubule center. Previous studies have been conducted with the visualization of the microtubule center; however, its composition has not been studied and reliably established. In the present study, several components of MTOC in diatoms, GCP (gamma complex proteins), Aurora A, and centrins have been identified. Analysis of the predicted amino acid sequences of these proteins revealed structural features typical for diatoms. We analyzed the conserved amino acids and the motives necessary for the functioning of proteins. Phylogenetic analysis of GCP showed that all major groups of diatoms are distributed over phylogenetic trees according to their systematic position. This work is a theoretical study; however, it allows drawing some conclusions about the functioning of the studied components and possible ways to regulate them.

摘要

硅藻在细胞内的细胞骨架和微管中心的控制下合成具有物种特异性的外壳。以前的研究已经对微管中心进行了可视化,但尚未对其组成进行研究和可靠确定。在本研究中,已经鉴定出硅藻的微管中心(MTOC)的几个成分,即 GCP(γ 复合物蛋白)、Aurora A 和中心蛋白。对这些蛋白质的预测氨基酸序列的分析显示出典型的硅藻结构特征。我们分析了保守氨基酸和蛋白质功能所必需的基序。GCP 的系统发育分析表明,所有主要的硅藻群体都根据其系统位置分布在系统发育树上。这项工作是一项理论研究,但它允许对所研究成分的功能和可能的调节方式得出一些结论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f378/10454807/86140929836a/ijms-24-12781-g001.jpg

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