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利用 COVID-19 作为疾病模型的人工智能驱动的未来病毒爆发患者分诊平台。

An AI-powered patient triage platform for future viral outbreaks using COVID-19 as a disease model.

机构信息

Department of Environmental Health Sciences, Yale School of Public Health, Yale University, New Haven, CT, USA.

Laboratory of Analytical Chemistry, Department of Chemistry, National and Kapodistrian University of Athens, Athens, Zografou, 15771, Greece.

出版信息

Hum Genomics. 2023 Aug 29;17(1):80. doi: 10.1186/s40246-023-00521-4.

Abstract

Over the last century, outbreaks and pandemics have occurred with disturbing regularity, necessitating advance preparation and large-scale, coordinated response. Here, we developed a machine learning predictive model of disease severity and length of hospitalization for COVID-19, which can be utilized as a platform for future unknown viral outbreaks. We combined untargeted metabolomics on plasma data obtained from COVID-19 patients (n = 111) during hospitalization and healthy controls (n = 342), clinical and comorbidity data (n = 508) to build this patient triage platform, which consists of three parts: (i) the clinical decision tree, which amongst other biomarkers showed that patients with increased eosinophils have worse disease prognosis and can serve as a new potential biomarker with high accuracy (AUC = 0.974), (ii) the estimation of patient hospitalization length with ± 5 days error (R = 0.9765) and (iii) the prediction of the disease severity and the need of patient transfer to the intensive care unit. We report a significant decrease in serotonin levels in patients who needed positive airway pressure oxygen and/or were intubated. Furthermore, 5-hydroxy tryptophan, allantoin, and glucuronic acid metabolites were increased in COVID-19 patients and collectively they can serve as biomarkers to predict disease progression. The ability to quickly identify which patients will develop life-threatening illness would allow the efficient allocation of medical resources and implementation of the most effective medical interventions. We would advocate that the same approach could be utilized in future viral outbreaks to help hospitals triage patients more effectively and improve patient outcomes while optimizing healthcare resources.

摘要

在过去的一个世纪里,传染病的爆发和大流行时有发生,这需要我们提前做好准备,并进行大规模的协调应对。在这里,我们开发了一种用于预测 COVID-19 疾病严重程度和住院时间的机器学习预测模型,该模型可作为未来未知病毒爆发的平台。我们结合了 COVID-19 住院患者(n=111)和健康对照者(n=342)的血浆无靶向代谢组学数据以及临床和合并症数据(n=508),构建了这个患者分诊平台,该平台由三部分组成:(i)临床决策树,该树显示,嗜酸性粒细胞增多的患者疾病预后较差,可作为一种新的潜在生物标志物,具有较高的准确性(AUC=0.974);(ii)预测患者住院时间,误差在±5 天内(R=0.9765);(iii)预测疾病严重程度和患者是否需要转入重症监护病房。我们报告了需要正压氧和/或插管的患者血清素水平显著降低。此外,5-羟色氨酸、尿囊素和葡萄糖醛酸代谢物在 COVID-19 患者中增加,它们共同可作为预测疾病进展的生物标志物。快速识别哪些患者会患上危及生命的疾病的能力将有助于医疗资源的有效分配和最有效的医疗干预措施的实施。我们主张,在未来的病毒爆发中,也可以采用同样的方法,帮助医院更有效地对患者进行分诊,并改善患者预后,同时优化医疗资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e09/10463861/300b040803e8/40246_2023_521_Fig1_HTML.jpg

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