文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

基于离子通道相关基因表达构建膀胱癌预后预测模型。

Construction of a prediction model for prognosis of bladder cancer based on the expression of ion channel-related genes.

机构信息

Department of Urology, Xuchang Central Hospital of Henan Province, Xuchang 461000, Henan Province, China.

Department of Urology, the Affiliated Hospital of Yangzhou University, Yangzhou 225000, Jiangsu Province, China.

出版信息

Zhejiang Da Xue Xue Bao Yi Xue Ban. 2023 Aug 25;52(4):499-509. doi: 10.3724/zdxbyxb-2023-0051.


DOI:10.3724/zdxbyxb-2023-0051
PMID:37643983
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10495249/
Abstract

OBJECTIVES: To construct a prediction model for the prognosis of bladder cancer patients based on the expression of ion channel-related genes (ICRGs). METHODS: ICRGs were obtained from the existing researches. The clinical information and the expression of ICRGs mRNA in breast cancer patients were obtained from the Cancer Genome Atlas database. Cox regression analysis, minimum absolute shrinkage and selection operator regression analysis were used to screen breast cancer prognosis related genes, which were verified by immunohistochemistry and qRT-PCR. The risk scoring equation for predicting the prognosis of patients with bladder cancer was constructed, and the patients were divided into high-risk group and low-risk group according to the median risk score. Immune cell infiltration was compared between the two groups. Kaplan-Meier survival curve and receiver operating characteristic (ROC) curve were used to evaluate the accuracy and clinical application value of the risk scoring equation. The factors related to the prognosis of bladder cancer patients were analyzed by univariate and multivariate Cox regression, and a nomogram for predicting the prognosis of bladder cancer patients was constructed. RESULTS: By comparing the expression levels of ICRGs in bladder cancer tissues and normal bladder tissues, 73 differentially expressed ICRGs were dentified, of which 11 were related to the prognosis of bladder cancer patients. Kaplan-Meier survival curve suggested that the risk score based on these 11 genes was negatively correlated with the prognosis of patients. The area under the ROC curve of the risk score for predicting the prognosis of patients at 1, 3 and 5 year was 0.634, 0.665 and 0.712, respectively. Stratified analysis showed that the ICRGs-based risk score performed well in predicting the prognosis of patients with American Joint Committee on Cancer (AJCC) stage Ⅲ-Ⅳ bladder cancer (<0.05), while it had a poor value in predicting the prognosis of patients with AJCC stage Ⅰ-Ⅱ (>0.05). There were significant differences in the infiltration of plasma cells, activated natural killer cells, resting mast cells and M2 macrophages between the high-risk group and the low-risk group. Cox regression analysis showed that risk score, smoking, age and AJCC stage were independently associated with the prognosis of patients with bladder cancer (<0.05). The nomogram constructed by combining risk score and clinical parameters has high accuracy in predicting the 1, 3 and 5 year overall survival rate of bladder cancer patients. CONCLUSIONS: The study shows the potential value of ICRGs in the prognostic risk assessment of bladder cancer patients. The constructed prognostic nomogram based on ICRGs risk score has high accuracy in predicting the prognosis of bladder cancer patients.

摘要

目的:基于离子通道相关基因(ICRG)的表达构建膀胱癌患者预后的预测模型。

方法:从已有的研究中获取 ICRG。从癌症基因组图谱数据库中获取乳腺癌患者的临床信息和 ICRG mRNA 的表达。使用 Cox 回归分析、最小绝对收缩和选择算子回归分析筛选与乳腺癌预后相关的基因,并通过免疫组化和 qRT-PCR 进行验证。构建预测膀胱癌患者预后的风险评分方程,并根据中位数风险评分将患者分为高风险组和低风险组。比较两组间免疫细胞浸润情况。采用 Kaplan-Meier 生存曲线和受试者工作特征(ROC)曲线评估风险评分方程的准确性和临床应用价值。采用单因素和多因素 Cox 回归分析膀胱癌患者预后的相关因素,并构建膀胱癌患者预后预测的列线图。

结果:通过比较膀胱癌组织和正常膀胱组织中 ICRG 的表达水平,鉴定出 73 个差异表达的 ICRG,其中 11 个与膀胱癌患者的预后相关。Kaplan-Meier 生存曲线提示基于这 11 个基因的风险评分与患者的预后呈负相关。预测患者 1、3 和 5 年预后的风险评分的 ROC 曲线下面积分别为 0.634、0.665 和 0.712。分层分析表明,ICRG 为基础的风险评分在预测 AJCC 分期Ⅲ-Ⅳ期膀胱癌患者的预后方面表现良好(<0.05),而在预测 AJCC 分期Ⅰ-Ⅱ期患者的预后方面价值较低(>0.05)。高风险组与低风险组间浆细胞、活化自然杀伤细胞、静止肥大细胞和 M2 巨噬细胞浸润存在显著差异。Cox 回归分析显示,风险评分、吸烟、年龄和 AJCC 分期与膀胱癌患者的预后独立相关(<0.05)。结合风险评分和临床参数构建的列线图在预测膀胱癌患者 1、3 和 5 年总生存率方面具有较高的准确性。

结论:本研究表明 ICRG 在膀胱癌患者预后风险评估中具有潜在价值。基于 ICRG 风险评分构建的预后列线图在预测膀胱癌患者预后方面具有较高的准确性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/97206ab68788/1008-9292-2023-52-4-499-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/6d598d73cfb7/1008-9292-2023-52-4-499-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/bdba6675d8b2/1008-9292-2023-52-4-499-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/2cef604bc544/1008-9292-2023-52-4-499-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/5128ad5605e8/1008-9292-2023-52-4-499-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/187093775769/1008-9292-2023-52-4-499-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/4f7d6c9a57c8/1008-9292-2023-52-4-499-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/ae41375c6b48/1008-9292-2023-52-4-499-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/97206ab68788/1008-9292-2023-52-4-499-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/6d598d73cfb7/1008-9292-2023-52-4-499-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/bdba6675d8b2/1008-9292-2023-52-4-499-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/2cef604bc544/1008-9292-2023-52-4-499-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/5128ad5605e8/1008-9292-2023-52-4-499-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/187093775769/1008-9292-2023-52-4-499-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/4f7d6c9a57c8/1008-9292-2023-52-4-499-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/ae41375c6b48/1008-9292-2023-52-4-499-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c0f/10495249/97206ab68788/1008-9292-2023-52-4-499-g008.jpg

相似文献

[1]
Construction of a prediction model for prognosis of bladder cancer based on the expression of ion channel-related genes.

Zhejiang Da Xue Xue Bao Yi Xue Ban. 2023-8-25

[2]
Construction of prognostic risk model of bladder cancer based on cuproptosis-related long non-coding RNAs.

Zhejiang Da Xue Xue Bao Yi Xue Ban. 2023-4-25

[3]
Construction of a novel mRNA-signature prediction model for prognosis of bladder cancer based on a statistical analysis.

BMC Cancer. 2021-7-27

[4]
Classification of bladder cancer based on immune cell infiltration and construction of a risk prediction model for prognosis.

Zhejiang Da Xue Xue Bao Yi Xue Ban. 2023-12-24

[5]
Construction and validation of a bladder cancer risk model based on autophagy-related genes.

Funct Integr Genomics. 2023-1-23

[6]
[Construction and Validation of Prognostic Risk Score Model of Autophagy Related Genes in Lung Adenocarcinoma].

Zhongguo Fei Ai Za Zhi. 2021-8-20

[7]
[Construction of prognostic model and identification of prognostic biomarkers based on the expression of long non-coding RNA in bladder cancer via bioinformatics].

Beijing Da Xue Xue Bao Yi Xue Ban. 2019-8-18

[8]
Comprehensive alteration-related transcriptomic characterization is involved in immune infiltration and correlated with prognosis and immunotherapy response of bladder cancer.

Front Immunol. 2022

[9]
[Risk modeling based on HER-2 related genes for bladder cancer survival prognosis assessment].

Beijing Da Xue Xue Bao Yi Xue Ban. 2023-10-18

[10]
Identification of a novel defined inflammation-related long noncoding RNA signature contributes to predicting prognosis and distinction between the cold and hot tumors in bladder cancer.

Front Oncol. 2023-3-29

本文引用的文献

[1]
PD-1, PD-L1 and cAMP immunohistochemical expressions are associated with worse oncological outcome in patients with bladder cancer.

J Cancer Res Clin Oncol. 2023-7

[2]
Therapeutic effects of a soluble guanylate cyclase activator, BAY 60-2770, on lower urinary tract dysfunction in mice with spinal cord injury.

Am J Physiol Renal Physiol. 2022-10-1

[3]
The Ion Channel-Related Gene Signatures Correlated With Diagnosis, Prognosis, and Individualized Treatment in Patients With Clear Cell Renal Cell Carcinoma.

Front Pharmacol. 2022-6-1

[4]
New Prognostic Gene Signature and Immune Escape Mechanisms of Bladder Cancer.

Front Cell Dev Biol. 2022-5-12

[5]
Identification and Quantification of Iron Metabolism Landscape on Therapy and Prognosis in Bladder Cancer.

Front Cell Dev Biol. 2022-2-21

[6]
Repurposing hyperpolarization-activated cyclic nucleotide-gated channels as a novel therapy for breast cancer.

Clin Transl Med. 2021-11

[7]
CircRNA hsa_circ_0014130 function as a miR-132-3p sponge for playing oncogenic roles in bladder cancer via upregulating KCNJ12 expression.

Cell Biol Toxicol. 2022-12

[8]
A novel survival model based on a Ferroptosis-related gene signature for predicting overall survival in bladder cancer.

BMC Cancer. 2021-8-21

[9]
Identification of autophagy-related genes signature predicts chemotherapeutic and immunotherapeutic efficiency in bladder cancer (BLCA).

J Cell Mol Med. 2021-6

[10]
Establishment and validation of a prognostic nomogram based on a novel five-DNA methylation signature for survival in endometrial cancer patients.

Cancer Med. 2021-1

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索