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从腹腔镜视频序列中修复手术遮挡以用于机器人辅助干预

Inpainting surgical occlusion from laparoscopic video sequences for robot-assisted interventions.

作者信息

Hasan S M Kamrul, Simon Richard A, Linte Cristian A

机构信息

Rochester Institute of Technology, Biomedical Modeling, Visualization, and Image-guided Navigation (BiMVisIGN) Lab, Rochester, New York, United States.

Rochester Institute of Technology, Center for Imaging Science, Rochester, New York, United States.

出版信息

J Med Imaging (Bellingham). 2023 Jul;10(4):045002. doi: 10.1117/1.JMI.10.4.045002. Epub 2023 Aug 29.

Abstract

PURPOSE

Medical technology for minimally invasive surgery has undergone a paradigm shift with the introduction of robot-assisted surgery. However, it is very difficult to track the position of the surgical tools in a surgical scene, so it is crucial to accurately detect and identify surgical tools. This task can be aided by deep learning-based semantic segmentation of surgical video frames. Furthermore, due to the limited working and viewing areas of these surgical instruments, there is a higher chance of complications from tissue injuries (e.g., tissue scars and tears).

APPROACH

With the aid of digital inpainting algorithms, we present an application that uses image segmentation to remove surgical instruments from laparoscopic/endoscopic video. We employ a modified U-Net architecture (U-NetPlus) to segment the surgical instruments. It consists of a redesigned decoder and a pre-trained VGG11 or VGG16 encoder. The decoder was modified by substituting an up-sampling operation based on nearest-neighbor interpolation for the transposed convolution operation. Furthermore, these interpolation weights do not need to be learned to perform upsampling, which eliminates the artifacts generated by the transposed convolution. In addition, we use a very fast and adaptable data augmentation technique to further enhance performance. The instrument segmentation mask is filled in (i.e., inpainted) by the tool removal algorithms using the previously acquired tool segmentation masks and either previous instrument-containing frames or instrument-free reference frames.

RESULTS

We have shown the effectiveness of the proposed surgical tool segmentation/removal algorithms on a robotic instrument dataset from the MICCAI 2015 and 2017 EndoVis Challenge. We report a 90.20% DICE for binary segmentation, a 76.26% DICE for instrument part segmentation, and a 46.07% DICE for instrument type (i.e., all instruments) segmentation on the MICCAI 2017 challenge dataset using our U-NetPlus architecture, outperforming the results of earlier techniques used and tested on these data. In addition, we demonstrated the successful execution of the tool removal algorithm from surgical tool-free videos that contained moving surgical tools that were generated artificially.

CONCLUSIONS

Our application successfully separates and eliminates the surgical tool to reveal a view of the background tissue that was otherwise hidden by the tool, producing results that are visually similar to the actual data.

摘要

目的

随着机器人辅助手术的引入,微创手术的医学技术发生了范式转变。然而,在手术场景中跟踪手术工具的位置非常困难,因此准确检测和识别手术工具至关重要。基于深度学习的手术视频帧语义分割有助于完成这项任务。此外,由于这些手术器械的工作和观察区域有限,组织损伤(如组织瘢痕和撕裂)引发并发症的几率更高。

方法

借助数字修复算法,我们提出了一种应用程序,该程序使用图像分割从腹腔镜/内窥镜视频中移除手术器械。我们采用改进的U-Net架构(U-NetPlus)对手术器械进行分割。它由重新设计的解码器和预训练的VGG11或VGG16编码器组成。解码器通过用基于最近邻插值的上采样操作替换转置卷积操作进行了修改。此外,这些插值权重在执行上采样时无需学习,这消除了转置卷积产生的伪影。此外,我们使用一种非常快速且适应性强的数据增强技术来进一步提高性能。使用先前获取的工具分割掩码以及先前包含器械的帧或无器械参考帧,通过工具移除算法填充(即修复)器械分割掩码。

结果

我们已经在来自MICCAI 2015和2017年EndoVis挑战赛的机器人器械数据集上展示了所提出的手术工具分割/移除算法的有效性。在MICCAI 2017挑战赛数据集上,使用我们的U-NetPlus架构进行二值分割时,DICE系数为90.20%,器械部分分割的DICE系数为76.26%,器械类型(即所有器械)分割的DICE系数为46.07%,优于在这些数据上使用和测试的早期技术的结果。此外,我们展示了从包含人工生成的移动手术工具的无手术工具视频中成功执行工具移除算法。

结论

我们的应用程序成功分离并消除了手术工具,以揭示原本被工具隐藏的背景组织视图,产生的结果在视觉上与实际数据相似。

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